RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 CUL5Q93034 780 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 TAAR1Q96RJ0 339 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 NCOA5Q9HCD5 579 aaKnown RBP17.4■□□□□ 0.38
SF3B2-202ENST00000524475 PXMP2Q9NR77 195 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 KIAA1217Q5T5P2 1943 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 ESYT2A0FGR8 921 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 STXBP3O00186 592 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 CDKL5O76039 1030 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 FARP2O94887 1054 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-202ENST00000524475 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-202ENST00000524475 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
SF3B2-202ENST00000524475 PDE4DQ08499 809 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 SCRN1Q12765 414 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 RABEP1Q15276 862 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 PKN1Q16512 942 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 IQSEC1Q6DN90 963 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 TAPT1Q6NXT6 567 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-202ENST00000524475 PDCD2LQ9BRP1 358 aa17.39■□□□□ 0.37
SF3B2-202ENST00000524475 SLKQ9H2G2 1235 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-202ENST00000524475 DNM1LO00429 736 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 CPLX1O14810 134 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 NR3C2P08235 984 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
SF3B2-202ENST00000524475 STXBP2Q15833 593 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 TYW1BQ6NUM6 668 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 FBXO16Q8IX29 292 aaPredicted RBP17.38■□□□□ 0.37
SF3B2-202ENST00000524475 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SF3B2-202ENST00000524475 PHKBQ93100 1093 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 UPF3AQ9H1J1 476 aaKnown RBP17.38■□□□□ 0.37
SF3B2-202ENST00000524475 RIC8AQ9NPQ8 531 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 Q9Y3F1 56 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 STK36Q9NRP7 1315 aa17.38■□□□□ 0.37
SF3B2-202ENST00000524475 PDE4DIPQ5VU43 2346 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 ADAMTS4O75173 837 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 EIF3JO75822 258 aaKnown RBP17.37■□□□□ 0.37
SF3B2-202ENST00000524475 STAM2O75886 525 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 DEXIO95424 95 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 COL6A1P12109 1028 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 CST5P28325 142 aaPredicted RBP17.37■□□□□ 0.37
SF3B2-202ENST00000524475 NAPAP54920 295 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 XRRA1Q6P2D8 792 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 SMARCC2Q8TAQ2 1214 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 SCFD2Q8WU76 684 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 GTF3C6Q969F1 213 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 LARP6Q9BRS8 491 aaKnown RBP17.37■□□□□ 0.37
SF3B2-202ENST00000524475 SLC26A6Q9BXS9 759 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 ZMYND12Q9H0C1 365 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
SF3B2-202ENST00000524475 GNEQ9Y223 722 aaKnown RBP17.37■□□□□ 0.37
SF3B2-202ENST00000524475 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 NKRFO15226 690 aaKnown RBP eCLIP17.36■□□□□ 0.37
SF3B2-202ENST00000524475 ADCY6O43306 1168 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 EIF2AK2P19525 551 aaKnown RBP17.36■□□□□ 0.37
SF3B2-202ENST00000524475 GJA9P57773 515 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
SF3B2-202ENST00000524475 TNFAIP2Q03169 654 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 SSRP1Q08945 709 aaKnown RBP17.36■□□□□ 0.37
SF3B2-202ENST00000524475 STK3Q13188 491 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 PGM5Q15124 567 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 ME3Q16798 604 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 DUSP28Q4G0W2 176 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 NECAB2Q7Z6G3 386 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 LIMCH1Q9UPQ0 1083 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 DDX49Q9Y6V7 483 aaKnown RBP17.36■□□□□ 0.37
SF3B2-202ENST00000524475 SYNRGQ9UMZ2 1314 aa17.36■□□□□ 0.37
SF3B2-202ENST00000524475 FOSP01100 380 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-202ENST00000524475 CCND2P30279 289 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 ADCYAP1R1P41586 468 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
SF3B2-202ENST00000524475 ADCY7P51828 1080 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 AP3B2Q13367 1082 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 LRRC41Q15345 812 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 MCTP2Q6DN12 878 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 RNF180Q86T96 592 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 TSEN34Q9BSV6 310 aaKnown RBP17.35■□□□□ 0.37
SF3B2-202ENST00000524475 SPC25Q9HBM1 224 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 PDGFCQ9NRA1 345 aa17.35■□□□□ 0.37
SF3B2-202ENST00000524475 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.34■□□□□ 0.37
SF3B2-202ENST00000524475 SMCO2A6NFE2 343 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 SMPD1P17405 629 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 GNA11P29992 359 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 TTLL4Q14679 1199 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 PCNX4Q63HM2 1172 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 CCDC62Q6P9F0 684 aa17.34■□□□□ 0.37
SF3B2-202ENST00000524475 KCNV1Q6PIU1 500 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms