RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 KRT23Q9C075 422 aa21.97■■□□□ 1.11
PTP4A3-206ENST00000524028 JMJD4Q9H9V9 463 aa21.97■■□□□ 1.11
PTP4A3-206ENST00000524028 SUPT16HQ9Y5B9 1047 aaKnown RBP21.97■■□□□ 1.11
PTP4A3-206ENST00000524028 ABCB11O95342 1321 aa21.97■■□□□ 1.11
PTP4A3-206ENST00000524028 A6NJR5 290 aa21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 NKRFO15226 690 aaKnown RBP eCLIP21.96■■□□□ 1.111e-6■■■□□ 17.4
PTP4A3-206ENST00000524028 TXNP10599 105 aaKnown RBP21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 CYP2C9P11712 490 aa21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 SCLYQ96I15 445 aa21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 MPHOSPH6Q99547 160 aaKnown RBP21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 MTG1Q9BT17 334 aaPredicted RBP21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 VAT1LQ9HCJ6 419 aa21.96■■□□□ 1.11
PTP4A3-206ENST00000524028 PARP1P09874 1014 aaKnown RBP21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 NBPF20Q3BBV1 942 aa21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 TTC22Q5TAA0 569 aa21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 CYB5R4Q7L1T6 521 aa21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 OTOP2Q7RTS6 562 aa21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 STAG2Q8N3U4 1231 aa21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 CNNM2Q9H8M5 875 aa21.95■■□□□ 1.1
PTP4A3-206ENST00000524028 SEC23AQ15436 765 aa21.94■■□□□ 1.1
PTP4A3-206ENST00000524028 CCDC62Q6P9F0 684 aa21.94■■□□□ 1.1
PTP4A3-206ENST00000524028 FBXO11Q86XK2 927 aa21.94■■□□□ 1.1
PTP4A3-206ENST00000524028 UBAC1Q9BSL1 405 aa21.94■■□□□ 1.1
PTP4A3-206ENST00000524028 MAF1Q9H063 256 aa21.94■■□□□ 1.1
PTP4A3-206ENST00000524028 GPHNQ9NQX3 736 aaPredicted RBP21.94■■□□□ 1.1
PTP4A3-206ENST00000524028 B4DLN1 442 aa21.93■■□□□ 1.1
PTP4A3-206ENST00000524028 DHX16O60231 1041 aaKnown RBP21.93■■□□□ 1.1
PTP4A3-206ENST00000524028 MRPL12P52815 198 aaKnown RBP21.93■■□□□ 1.1
PTP4A3-206ENST00000524028 TTLL4Q14679 1199 aa21.93■■□□□ 1.1
PTP4A3-206ENST00000524028 IFIT1BQ5T764 474 aaKnown RBP21.93■■□□□ 1.1
PTP4A3-206ENST00000524028 NSUN6Q8TEA1 469 aaKnown RBP21.93■■□□□ 1.1
PTP4A3-206ENST00000524028 RAD50Q92878 1312 aa21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 OPLAHO14841 1288 aa21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 SUPT20HL2P0C7V6 817 aa21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 LY6KQ17RY6 165 aa21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 BRDTQ58F21 947 aaPredicted RBP21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 SEPT14Q6ZU15 432 aa21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 MCF2L2Q86YR7 1114 aa21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 MRPL11Q9Y3B7 192 aaKnown RBP21.92■■□□□ 1.1
PTP4A3-206ENST00000524028 KPNA6O60684 536 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 PPP1R11O60927 126 aaPredicted RBP21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 PTH1RQ03431 593 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 FAM47CQ5HY64 1035 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 NFRKBQ6P4R8 1299 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 RPUSD2Q8IZ73 545 aaKnown RBP21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 USP38Q8NB14 1042 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 RMDN3Q96TC7 470 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 MAD2L2Q9UI95 211 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 YBX2Q9Y2T7 364 aaKnown RBP21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 PRUNE2Q8WUY3 3088 aa21.91■■□□□ 1.1
PTP4A3-206ENST00000524028 KLRF2D3W0D1 207 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 CHMLP26374 656 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 ARHGAP1Q07960 439 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 SLC35G1Q2M3R5 365 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 AFG1LQ8WV93 481 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 MTMR8Q96EF0 704 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 IWS1Q96ST2 819 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 MTIF3Q9H2K0 278 aaKnown RBP21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 NKX2-4Q9H2Z4 354 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 PRDM12Q9H4Q4 367 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 MSRAQ9UJ68 235 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 TAF6LQ9Y6J9 622 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 CHD9Q3L8U1 2897 aa21.9■■□□□ 1.1
PTP4A3-206ENST00000524028 CYP21A2P08686 494 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 EIF2AK2P19525 551 aaKnown RBP21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 RABGGTBP53611 331 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 RAB30Q15771 203 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 STXBP2Q15833 593 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 ARHGEF16Q5VV41 709 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 AMNQ9BXJ7 453 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 SENP2Q9HC62 589 aa21.89■■□□□ 1.09
PTP4A3-206ENST00000524028 VCANP13611 3396 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 PALM3A6NDB9 673 aaPredicted RBP21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 CFBP00751 764 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 GH1P01241 217 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 MMP3P08254 477 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 HSD17B4P51659 736 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 IRX6P78412 446 aaPredicted RBP21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 DEFB128Q7Z7B8 93 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 PXMP2Q9NR77 195 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 SCN10AQ9Y5Y9 1956 aa21.88■■□□□ 1.09
PTP4A3-206ENST00000524028 NR3C2P08235 984 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 MYOGP15173 224 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 CHMP4BP1P59074 171 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 GHRHRQ02643 423 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 PTPN11Q06124 597 aaPredicted RBP21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 CHST3Q7LGC8 479 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 KAT2BQ92831 832 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 CTAGE1Q96RT6 745 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 DDX41Q9UJV9 622 aaKnown RBP21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 SLC4A7Q9Y6M7 1214 aa21.87■■□□□ 1.09
PTP4A3-206ENST00000524028 ZBBXA8MT70 800 aa21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 ZBTB5O15062 677 aa21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 EIF3JO75822 258 aaKnown RBP21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 IQCF3P0C7M6 154 aa21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 ADGRE1Q14246 886 aa21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 RUFY2Q8WXA3 655 aa21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 PCDHA1Q9Y5I3 950 aa21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
PTP4A3-206ENST00000524028 RGS20O76081 388 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms