RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	ERMN	Q8TAM6	284 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	SNX29	Q8TEQ0	813 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	TRIM47	Q96LD4	638 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	FEZ1	Q99689	392 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	ANO3	Q9BYT9	981 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	TMEM232	C9JQI7	657 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006		F5H6K3	240 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	PES1	O00541	588 aa	Known RBP	12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	SLC26A4	O43511	780 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	TDP2	O95551	362 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	FOS	P01100	380 aa	Predicted RBP	12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	VIL1	P09327	827 aa	Known RBP	12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	CDC25A	P30304	524 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	EPHX2	P34913	555 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	KCNJ6	P48051	423 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	VEGFB	P49765	207 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	STAT2	P52630	851 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	KLRC3	Q07444	240 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	TNFAIP1	Q13829	316 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	TRIM14	Q14142	442 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	USH1G	Q495M9	461 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	SPDYE2	Q495Y8	402 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	EAPP	Q56P03	285 aa	Predicted RBP	12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	CIAPIN1	Q6FI81	312 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	SH3BP5L	Q7L8J4	393 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	SLFN12	Q8IYM2	578 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	ZNF592	Q92610	1267 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	PRMT6	Q96LA8	375 aa	Predicted RBP	12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	HACL1	Q9UJ83	578 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	STK24	Q9Y6E0	443 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	SCN4A	P35499	1836 aa		12.07	□□□□□ -0.48
SPIDR-222	ENST00000524006	GOLGA6L9	A6NEM1	432 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	TMEM88B	A6NKF7	163 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	DYNC1I1	O14576	645 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	ZSCAN12	O43309	604 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	FGFR1OP	O95684	399 aa	Known RBP	12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	ZNF18	P17022	549 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	ZNF76	P36508	570 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	PDE4D	Q08499	809 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	ARID5B	Q14865	1188 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	KMT5B	Q4FZB7	885 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	FKBP1C	Q5VVH2	108 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	CEP135	Q66GS9	1140 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	HAUS3	Q68CZ6	603 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	PPP4R3A	Q6IN85	833 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	FCHSD1	Q86WN1	690 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	CHURC1	Q8WUH1	139 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	DPF2	Q92785	391 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	MTMR8	Q96EF0	704 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	NT5C3A	Q9H0P0	336 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	SAMSN1	Q9NSI8	373 aa	Known RBP	12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	ZBTB21	Q9ULJ3	1066 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	PAXBP1	Q9Y5B6	917 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.06	□□□□□ -0.48	2e-6	■■■■□ 25.9
SPIDR-222	ENST00000524006	COL4A5	P29400	1685 aa		12.06	□□□□□ -0.48
SPIDR-222	ENST00000524006	KCNJ18	B7U540	433 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	PPP1R3G	B7ZBB8	358 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	N4BP3	O15049	544 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	SLC37A4	O43826	429 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	TUBB4A	P04350	444 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	SSB	P05455	408 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	KRT18	P05783	430 aa	Known RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	CCT6A	P40227	531 aa	Known RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	MMP14	P50281	582 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	KCNJ12	Q14500	433 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	PDIA5	Q14554	519 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	CDKAL1	Q5VV42	579 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	MAP1S	Q66K74	1059 aa	Predicted RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	ARMCX5	Q6P1M9	558 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	FAM83A	Q86UY5	434 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	FAM160B2	Q86V87	743 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	TEX2	Q8IWB9	1127 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	GPC2	Q8N158	579 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	CCAR2	Q8N163	923 aa	Known RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	IGSF22	Q8N9C0	903 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	MYRIP	Q8NFW9	859 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	LARP4B	Q92615	738 aa	Known RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	NUP88	Q99567	741 aa	Predicted RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	TSG101	Q99816	390 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	HSD3B7	Q9H2F3	369 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	KBTBD4	Q9NVX7	518 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	CLEC11A	Q9Y240	323 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	GDA	Q9Y2T3	454 aa		12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.05	□□□□□ -0.48
SPIDR-222	ENST00000524006	PARP14	Q460N5	1801 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006		A0A1B0GTH6	734 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006		H7C1D1	291 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	ARHGAP6	O43182	974 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	PPP1R11	O60927	126 aa	Predicted RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	RHOBTB3	O94955	611 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	CD44	P16070	742 aa	Known RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	EEF1G	P26641	437 aa	Known RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	CLK2	P49760	499 aa	Known RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	USP11	P51784	963 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	TSR1	Q2NL82	804 aa	Known RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	MOXD1	Q6UVY6	613 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms