RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FRMPD4Q14CM0 1322 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 RBM47A0AV96 593 aaKnown RBP14.45□□□□□ -0.1
VEGFA-225ENST00000523950 KBTBD13C9JR72 458 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 CPLX1O14810 134 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 CDKL5O76039 1030 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 SCG2P13521 617 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
VEGFA-225ENST00000523950 NEK4P51957 841 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 AK2P54819 239 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 NAPAP54920 295 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 NKX3-2P78367 333 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 CCT2P78371 535 aaKnown RBP14.45□□□□□ -0.1
VEGFA-225ENST00000523950 TNFAIP2Q03169 654 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 STXBP2Q15833 593 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 WWC2Q6AWC2 1192 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 TAPT1Q6NXT6 567 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 FBXO16Q8IX29 292 aaPredicted RBP14.45□□□□□ -0.1
VEGFA-225ENST00000523950 TRIM22Q8IYM9 498 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 CCDC12Q8WUD4 166 aaPredicted RBP14.45□□□□□ -0.1
VEGFA-225ENST00000523950 PAWRQ96IZ0 340 aaKnown RBP14.45□□□□□ -0.1
VEGFA-225ENST00000523950 C11orf49Q9H6J7 331 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 PSTPIP2Q9H939 334 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 BARHL2Q9NY43 387 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 Q9Y3F1 56 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 BRCA2P51587 3418 aa14.45□□□□□ -0.1
VEGFA-225ENST00000523950 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 ESYT2A0FGR8 921 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 MEIS2O14770 477 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 NKRFO15226 690 aaKnown RBP eCLIP14.44□□□□□ -0.14e-7■□□□□ 10.1
VEGFA-225ENST00000523950 PFKFB2O60825 505 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 ADAMTS4O75173 837 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 EIF3JO75822 258 aaKnown RBP14.44□□□□□ -0.1
VEGFA-225ENST00000523950 STAM2O75886 525 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 CST5P28325 142 aaPredicted RBP14.44□□□□□ -0.1
VEGFA-225ENST00000523950 HOXA13P31271 388 aaPredicted RBP14.44□□□□□ -0.1
VEGFA-225ENST00000523950 ANO1Q5XXA6 986 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 FAM177A1Q8N128 213 aaPredicted RBP14.44□□□□□ -0.1
VEGFA-225ENST00000523950 SCFD2Q8WU76 684 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 PDCD2LQ9BRP1 358 aa14.44□□□□□ -0.1
VEGFA-225ENST00000523950 UPF3AQ9H1J1 476 aaKnown RBP14.44□□□□□ -0.1
VEGFA-225ENST00000523950 SLKQ9H2G2 1235 aaPredicted RBP14.44□□□□□ -0.1
VEGFA-225ENST00000523950 SYNRGQ9UMZ2 1314 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 STXBP3O00186 592 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 NR3C2P08235 984 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 COL6A1P12109 1028 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 EIF2AK2P19525 551 aaKnown RBP14.43□□□□□ -0.1
VEGFA-225ENST00000523950 ADCYAP1R1P41586 468 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 GJA9P57773 515 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 PGM5Q15124 567 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 LRRC41Q15345 812 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 DUSP28Q4G0W2 176 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 MCTP2Q6DN12 878 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 XRRA1Q6P2D8 792 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 EEPD1Q7L9B9 569 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 FCHSD1Q86WN1 690 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 GPKOWQ92917 476 aaPredicted RBP eCLIP14.43□□□□□ -0.19e-7■□□□□ 11
VEGFA-225ENST00000523950 TSEN34Q9BSV6 310 aaKnown RBP14.43□□□□□ -0.1
VEGFA-225ENST00000523950 SLC26A6Q9BXS9 759 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 EHMT1Q9H9B1 1298 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 NCOA5Q9HCD5 579 aaKnown RBP14.43□□□□□ -0.1
VEGFA-225ENST00000523950 RIC8AQ9NPQ8 531 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 TPCN1Q9ULQ1 816 aa14.43□□□□□ -0.1
VEGFA-225ENST00000523950 GNEQ9Y223 722 aaKnown RBP14.43□□□□□ -0.1
VEGFA-225ENST00000523950 MOXD2PA6NHM9 499 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 SPDYE3A6NKU9 549 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 DEXIO95424 95 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 FOSP01100 380 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-225ENST00000523950 CCND2P30279 289 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 ADCY7P51828 1080 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 SSRP1Q08945 709 aaKnown RBP14.42□□□□□ -0.1
VEGFA-225ENST00000523950 SCRN1Q12765 414 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 RABEP1Q15276 862 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 PKN1Q16512 942 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 KCNV1Q6PIU1 500 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 TLK2Q86UE8 772 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 VSIG10LQ86VR7 867 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 PCSK9Q8NBP7 692 aaKnown RBP14.42□□□□□ -0.1
VEGFA-225ENST00000523950 KLHDC9Q8NEP7 349 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 DIS3LQ8TF46 1054 aaKnown RBP14.42□□□□□ -0.1
VEGFA-225ENST00000523950 PHKBQ93100 1093 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 KIF2CQ99661 725 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 WDR11Q9BZH6 1224 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 AP5M1Q9H0R1 490 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 SH3GLB2Q9NR46 395 aa14.42□□□□□ -0.1
VEGFA-225ENST00000523950 STK36Q9NRP7 1315 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-225ENST00000523950 SMCO2A6NFE2 343 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 ADCY6O43306 1168 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 PGK1P00558 417 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 SMPD1P17405 629 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 GNA11P29992 359 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 STK3Q13188 491 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 AP3B2Q13367 1082 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-225ENST00000523950 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
VEGFA-225ENST00000523950 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms