RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 AGPAT5Q9NUQ2 364 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 CTAGE15A4D2H0 777 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
TNPO1-213ENST00000523768 TDP2O95551 362 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 CTAGE8P0CG41 777 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 MCM6Q14566 821 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 LONRF2Q1L5Z9 754 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 CTAGE4Q8IX94 777 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 GUF1Q8N442 669 aaKnown RBP12.62□□□□□ -0.39
TNPO1-213ENST00000523768 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 ATP6V0A2Q9Y487 856 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 EIF3CLB5ME19 914 aaKnown RBP12.62□□□□□ -0.39
TNPO1-213ENST00000523768 TUBBP07437 444 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 TMEM119Q4V9L6 283 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 FKBP15Q5T1M5 1219 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 CERS5Q8N5B7 392 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 RAD54LQ92698 747 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 EIF3CQ99613 913 aaKnown RBP12.62□□□□□ -0.39
TNPO1-213ENST00000523768 LRRC27Q9C0I9 530 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 SLC39A2Q9NP94 309 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 TRIM10Q9UDY6 481 aa12.62□□□□□ -0.39
TNPO1-213ENST00000523768 MAP2K7O14733 419 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 EHHADHQ08426 723 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 EHBP1Q8NDI1 1231 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 EEF2KMTQ96G04 330 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 KRT86O43790 486 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 HNRNPH3P31942 346 aaKnown RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 SHMT1P34896 483 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 KLK7P49862 253 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 PSMD2Q13200 908 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 BEND6Q5SZJ8 279 aaPredicted RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 CCDC122Q5T0U0 273 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 PAPD7Q5XG87 772 aaKnown RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 MSL3Q8N5Y2 521 aaKnown RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 HPS3Q969F9 1004 aa12.61□□□□□ -0.39
TNPO1-213ENST00000523768 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
TNPO1-213ENST00000523768 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 PPP1R11O60927 126 aaPredicted RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 EIF6P56537 245 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 LRRC63Q05C16 580 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 SMC1AQ14683 1233 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 PNKPQ96T60 521 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 USP40Q9NVE5 1235 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 POTEMA6NI47 508 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 ERLIN1O75477 346 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 CUL5Q93034 780 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 JAKMIP2Q96AA8 810 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 NUDT12Q9BQG2 462 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 SIK3Q9Y2K2 1263 aa12.6□□□□□ -0.39
TNPO1-213ENST00000523768 GREB1LQ9C091 1923 aaPredicted RBP12.6□□□□□ -0.39
TNPO1-213ENST00000523768 ZBTB5O15062 677 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■□□□□ 9.5
TNPO1-213ENST00000523768 IPO7O95373 1038 aaKnown RBP12.59□□□□□ -0.39
TNPO1-213ENST00000523768 TNNI2P48788 182 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 SEPT2Q15019 361 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 KIAA1328Q86T90 577 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 PCMTD1Q96MG8 357 aaPredicted RBP12.59□□□□□ -0.39
TNPO1-213ENST00000523768 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 DDX25Q9UHL0 483 aaKnown RBP12.59□□□□□ -0.39
TNPO1-213ENST00000523768 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
TNPO1-213ENST00000523768 UBE2SQ16763 222 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 HYIQ5T013 277 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 TTBK2Q6IQ55 1244 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 DYMQ7RTS9 669 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 KCNK18Q7Z418 384 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 DDX12PQ92771 950 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 HAS1Q92839 578 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 NAP1L4Q99733 375 aaKnown RBP12.59□□□□□ -0.39
TNPO1-213ENST00000523768 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 EHD4Q9H223 541 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 L1RE1Q9UN81 338 aa12.59□□□□□ -0.39
TNPO1-213ENST00000523768 HLA-DOAP06340 250 aa12.58□□□□□ -0.39
TNPO1-213ENST00000523768 OAS2P29728 719 aaKnown RBP12.58□□□□□ -0.39
TNPO1-213ENST00000523768 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.39
TNPO1-213ENST00000523768 CDC42EP5Q6NZY7 148 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms