RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 TOP2AP11388 1531 aaKnown RBP6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 RUSC2Q8N2Y8 1516 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 PPP1R11O60927 126 aaPredicted RBP6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 TACR1P25103 407 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 MC3RP41968 323 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 ZXDCQ2QGD7 858 aaPredicted RBP6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 NT5DC1Q5TFE4 455 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 RCSD1Q6JBY9 416 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 B3GNT8Q7Z7M8 397 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 TSPAN17Q96FV3 270 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 BORCS6Q96GS4 357 aa6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 NOL6Q9H6R4 1146 aaKnown RBP6.67□□□□□ -1.34
NSMCE2-211ENST00000523549 NOBOXO60393 691 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 CD3EP07766 207 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 ITGA4P13612 1032 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 HHIPL2Q6UWX4 724 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 FERD3LQ96RJ6 166 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 FBLN5Q9UBX5 448 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 PPT2Q9UMR5 302 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 DUSP10Q9Y6W6 482 aa6.66□□□□□ -1.34
NSMCE2-211ENST00000523549 AURKAO14965 403 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 ZNF76P36508 570 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 FANCCQ00597 558 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 EEF1DP3Q658K8 133 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 USP48Q86UV5 1035 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 FERMT3Q86UX7 667 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 FAM86C1Q9NVL1 165 aa6.65□□□□□ -1.34
NSMCE2-211ENST00000523549 ARID4BQ4LE39 1312 aaPredicted RBP6.65□□□□□ -1.35
NSMCE2-211ENST00000523549 PMLP29590 882 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 RACK1P63244 317 aaKnown RBP6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 TCEAL1Q15170 157 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 ZNF394Q53GI3 561 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 UBXN11Q5T124 520 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 CARFQ8N187 725 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 RGS22Q8NE09 1264 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 CPA5Q8WXQ8 436 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 ALG3Q92685 438 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 ZDHHC15Q96MV8 337 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 BACH2Q9BYV9 841 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 KLHL25Q9H0H3 589 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 SPATA6Q9NWH7 488 aaPredicted RBP6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 DBR1Q9UK59 544 aaKnown RBP6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 FAN1Q9Y2M0 1017 aa6.64□□□□□ -1.35
NSMCE2-211ENST00000523549 ZNF16P17020 682 aaPredicted RBP6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 NOX5Q96PH1 765 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 RBM15Q96T37 977 aaKnown RBP eCLIP6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 HAUS7Q99871 368 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 SIGLEC1Q9BZZ2 1709 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 BCAS3Q9H6U6 928 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 RXFP1Q9HBX9 757 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 METTL5Q9NRN9 209 aaKnown RBP6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 USP40Q9NVE5 1235 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 WHRNQ9P202 907 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 MYRFQ9Y2G1 1151 aa6.63□□□□□ -1.35
NSMCE2-211ENST00000523549 TTC37Q6PGP7 1564 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 TRIM26Q12899 539 aaPredicted RBP6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 SLC9A5Q14940 896 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 LNPKQ9C0E8 428 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
NSMCE2-211ENST00000523549 TTBK1Q5TCY1 1321 aaPredicted RBP6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 K7ESM1 405 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 VAMP4O75379 141 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 INSRRP14616 1297 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 CACNB2Q08289 660 aaPredicted RBP6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 ARHGEF39Q8N4T4 335 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 LZTR1Q8N653 840 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 SMARCC2Q8TAQ2 1214 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 BCL11AQ9H165 835 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 DDX41Q9UJV9 622 aaKnown RBP6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 RWDD3Q9Y3V2 267 aa6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 ZCCHC11Q5TAX3 1644 aaKnown RBP6.61□□□□□ -1.35
NSMCE2-211ENST00000523549 CUX1P39880 1505 aa6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 ZBTB7AO95365 584 aa6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 ITGB3P05106 788 aa6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 COL9A2Q14055 689 aaPredicted RBP6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 ADCY4Q8NFM4 1077 aa6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 DDX1Q92499 740 aaKnown RBP6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 RNF34Q969K3 372 aa6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 MAGI3Q5TCQ9 1506 aa6.6□□□□□ -1.35
NSMCE2-211ENST00000523549 ZNF335Q9H4Z2 1342 aaPredicted RBP6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 C2orf71A6NGG8 1288 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 CNR2P34972 360 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 MAGEA10P43363 369 aaPredicted RBP6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 SARSP49591 514 aaKnown RBP6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 GNPTABQ3T906 1256 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 CABP7Q86V35 215 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 CPNE8Q86YQ8 564 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 ZNF513Q8N8E2 541 aaPredicted RBP6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 RCC1LQ96I51 464 aaKnown RBP6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 BACE2Q9Y5Z0 518 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 SLC12A7Q9Y666 1083 aa6.59□□□□□ -1.35
NSMCE2-211ENST00000523549 CCDC88BA6NC98 1476 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms