RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 SLC37A4O43826 429 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 TDP2O95551 362 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 EEF2P13639 858 aaKnown RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 SLC16A2P36021 539 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 TNNI2P48788 182 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 RBM5P52756 815 aaKnown RBP eCLIP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 COPB1P53618 953 aaKnown RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 ETF1P62495 437 aaKnown RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 NCBP1Q09161 790 aaKnown RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 STIM1Q13586 685 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 KCNJ12Q14500 433 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 CERKLQ49MI3 558 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 TATDN1Q6P1N9 297 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 SYT10Q6XYQ8 523 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 KCTD1Q719H9 257 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 PPFIBP1Q86W92 1011 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 ANKRD20A12PQ8NF67 263 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 L3MBTL3Q96JM7 780 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 GTPBP4Q9BZE4 634 aaKnown RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 TRIM9Q9C026 710 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 KANSL2Q9H9L4 492 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 MAPK8IP1Q9UQF2 711 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 PPP2R2CQ9Y2T4 447 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 BOLA1Q9Y3E2 137 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 TNS1Q9HBL0 1735 aaKnown RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 PHLPP2Q6ZVD8 1323 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 RGPD3A6NKT7 1758 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-210ENST00000523276 RGPD4Q7Z3J3 1758 aa7.48□□□□□ -1.21
SHPRH-210ENST00000523276 GOLGA6L9A6NEM1 432 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 N4BP3O15049 544 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 MFAP3LO75121 409 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 CCT6AP40227 531 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TXKP42681 527 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 MRPL12P52815 198 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 AMPD3Q01432 767 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 RBL2Q08999 1139 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 GRB10Q13322 594 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 SLC15A2Q16348 729 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 UBE2SQ16763 222 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 AOC3Q16853 763 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TMEM266Q2M3C6 531 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 SHROOM1Q2M3G4 852 aaPredicted RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 CC2D2BQ6DHV5 1058 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 PPP4R3AQ6IN85 833 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TRIM65Q6PJ69 517 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TOGARAM2Q6ZUX3 1019 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 IRF2BP1Q8IU81 584 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 SUPT20HQ8NEM7 779 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 NOC3LQ8WTT2 800 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 CCDC47Q96A33 483 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 CALML4Q96GE6 196 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 DHTKD1Q96HY7 919 aaPredicted RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 NAA15Q9BXJ9 866 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TRIM34Q9BYJ4 488 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 GLT8D2Q9H1C3 349 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 THAP9Q9H5L6 903 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 L2HGDHQ9H9P8 463 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TAB2Q9NYJ8 693 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 STK17AQ9UEE5 414 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 LRWD1Q9UFC0 647 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 ATRNL1Q5VV63 1379 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TRIM49BA6NDI0 452 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 PSMA7O14818 248 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 ENTPD3O75355 529 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 GYPCP04921 128 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 PMS1P54277 932 aaKnown RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 ASIC1P78348 528 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 ICA1Q05084 483 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 PDIA5Q14554 519 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TTI2Q6NXR4 508 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 TMEM179Q6ZVK1 233 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 SIAH1Q8IUQ4 282 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 CNGA4Q8IV77 575 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 ZSCAN29Q8IWY8 852 aaPredicted RBP7.47□□□□□ -1.21
SHPRH-210ENST00000523276 CCDC51Q96ER9 411 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 PNMA5Q96PV4 448 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 RAB34Q9BZG1 259 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 VPS16Q9H269 839 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 PSTPIP2Q9H939 334 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 EXOC1Q9NV70 894 aa7.47□□□□□ -1.21
SHPRH-210ENST00000523276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.47□□□□□ -1.214e-15■■■■□ 24.5
SHPRH-210ENST00000523276 ZNF646O15015 1829 aaPredicted RBP7.46□□□□□ -1.21
SHPRH-210ENST00000523276 SIPA1L1O43166 1804 aa7.46□□□□□ -1.21
SHPRH-210ENST00000523276 COL2A1P02458 1487 aaPredicted RBP7.46□□□□□ -1.21
SHPRH-210ENST00000523276 SLU7O95391 586 aaKnown RBP7.46□□□□□ -1.22
SHPRH-210ENST00000523276 TPM1P09493 284 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 GCFC2P16383 781 aaKnown RBP7.46□□□□□ -1.22
SHPRH-210ENST00000523276 EEF1GP26641 437 aaKnown RBP7.46□□□□□ -1.22
SHPRH-210ENST00000523276 CASP14P31944 242 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 PPP1R2P41236 205 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 SLC1A4P43007 532 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 TRIM14Q14142 442 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 SEPT2Q15019 361 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 QRICH1Q2TAL8 776 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 TMEM119Q4V9L6 283 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 COBLL1Q53SF7 1204 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 CCDC93Q567U6 631 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms