RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 PDE4DQ08499 809 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 CCDC62Q6P9F0 684 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 OTOP2Q7RTS6 562 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 SMC5Q8IY18 1101 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 OR6J1Q8NGC5 347 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 IWS1Q96ST2 819 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 SLC9A7Q96T83 725 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 DDX49Q9Y6V7 483 aaKnown RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 BAIAP3O94812 1187 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 ACTN1P12814 892 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 PTGS1P23219 599 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
SDC2-207ENST00000522911 TTLL4Q14679 1199 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 NBPF20Q3BBV1 942 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 NKX2-4Q9H2Z4 354 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
SDC2-207ENST00000522911 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
SDC2-207ENST00000522911 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
SDC2-207ENST00000522911 CALML3P27482 149 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 BFSP2Q13515 415 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 ASPRV1Q53RT3 343 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 RRP12Q5JTH9 1297 aaKnown RBP11.01□□□□□ -0.65
SDC2-207ENST00000522911 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 IQCA1Q86XH1 822 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 TBC1D10CQ8IV04 446 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 SAMD3Q8N6K7 520 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 AFAP1L1Q8TED9 768 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 SCLYQ96I15 445 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
SDC2-207ENST00000522911 TOMM22Q9NS69 142 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 MAP3K20Q9NYL2 800 aaKnown RBP11.01□□□□□ -0.65
SDC2-207ENST00000522911 ABCB11O95342 1321 aa11.01□□□□□ -0.65
SDC2-207ENST00000522911 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
SDC2-207ENST00000522911 HIP1O00291 1037 aa11□□□□□ -0.65
SDC2-207ENST00000522911 ZNF213O14771 459 aa11□□□□□ -0.65
SDC2-207ENST00000522911 MYL3P08590 195 aa11□□□□□ -0.65
SDC2-207ENST00000522911 TXNP10599 105 aaKnown RBP11□□□□□ -0.65
SDC2-207ENST00000522911 CYP2C9P11712 490 aa11□□□□□ -0.65
SDC2-207ENST00000522911 SDSP20132 328 aa11□□□□□ -0.65
SDC2-207ENST00000522911 TMEM67Q5HYA8 995 aa11□□□□□ -0.65
SDC2-207ENST00000522911 MCF2L2Q86YR7 1114 aa11□□□□□ -0.65
SDC2-207ENST00000522911 CCDC155Q8N6L0 562 aa11□□□□□ -0.65
SDC2-207ENST00000522911 PNMA1Q8ND90 353 aa11□□□□□ -0.65
SDC2-207ENST00000522911 NSUN6Q8TEA1 469 aaKnown RBP11□□□□□ -0.65
SDC2-207ENST00000522911 CTAGE1Q96RT6 745 aa11□□□□□ -0.65
SDC2-207ENST00000522911 DSCC1Q9BVC3 393 aa11□□□□□ -0.65
SDC2-207ENST00000522911 MTMR7Q9Y216 660 aa11□□□□□ -0.65
SDC2-207ENST00000522911 MYO9BQ13459 2157 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 ARIH2O95376 493 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 GH1P01241 217 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 CXCL10P02778 98 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 MMP3P08254 477 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 HAND2P61296 217 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 ARHGAP1Q07960 439 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 STXBP2Q15833 593 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 AAK1Q2M2I8 961 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 SYTL5Q8TDW5 730 aaPredicted RBP10.99□□□□□ -0.65
SDC2-207ENST00000522911 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 MTMR8Q96EF0 704 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 CRBNQ96SW2 442 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 LMCD1Q9NZU5 365 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 MRPL11Q9Y3B7 192 aaKnown RBP10.99□□□□□ -0.65
SDC2-207ENST00000522911 NEDD4P46934 1319 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 TANC1Q9C0D5 1861 aa10.99□□□□□ -0.65
SDC2-207ENST00000522911 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 GBF1Q92538 1859 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 ZBBXA8MT70 800 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 KIF28PB7ZC32 967 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 HAS3O00219 553 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 EFCAB14O75071 495 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 EIF3JO75822 258 aaKnown RBP10.98□□□□□ -0.65
SDC2-207ENST00000522911 BMP1P13497 986 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 CASTP20810 708 aaKnown RBP10.98□□□□□ -0.65
SDC2-207ENST00000522911 IGFBP4P22692 258 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 HSD17B4P51659 736 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 RABGGTBP53611 331 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
SDC2-207ENST00000522911 DGKDQ16760 1214 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 HERC6Q8IVU3 1022 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 ENAHQ8N8S7 591 aaPredicted RBP10.98□□□□□ -0.65
SDC2-207ENST00000522911 ADAMTS19Q8TE59 1207 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 KAT2BQ92831 832 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 COPS5Q92905 334 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
SDC2-207ENST00000522911 KATNAL1Q9BW62 490 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 CNNM2Q9H8M5 875 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 GTF2IRD1Q9UHL9 959 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 COG5Q9UP83 839 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 MTCH2Q9Y6C9 303 aa10.98□□□□□ -0.65
SDC2-207ENST00000522911 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms