RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CPT1AP50416 773 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 NKX3-2P78367 333 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 ZNF365Q70YC5 407 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 HOMER1Q86YM7 354 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 DNERQ8NFT8 737 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 SYTL5Q8TDW5 730 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 SCFD2Q8WU76 684 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 MYLIPQ8WY64 445 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 RMDN3Q96TC7 470 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 MRPL11Q9Y3B7 192 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-235ENST00000522730 UMODL1Q5DID0 1318 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 RBM47A0AV96 593 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 SORBS3O60504 671 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 B4GALT4O60513 344 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 FGBP02675 491 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 CYP21A2P08686 494 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 CYP2C9P11712 490 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 NT5C2P49902 561 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 SEC23AQ15436 765 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 LY6KQ17RY6 165 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 TMEM240Q5SV17 173 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 NSUN6Q8TEA1 469 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 TTYH1Q9H313 450 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 COL20A1Q9P218 1284 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 TAF6LQ9Y6J9 622 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 LTBP2Q14767 1821 aa11.92□□□□□ -0.5
CTNNA1-235ENST00000522730 RAD50Q92878 1312 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 LOC102724159A0A0B4J2E5 919 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 E7EWF7 191 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 ARIH2O95376 493 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 MYCLP12524 364 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 PURAQ00577 322 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 WTAPQ15007 396 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 PWP2Q15269 919 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 STXBP2Q15833 593 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 TMEM67Q5HYA8 995 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 OTOP2Q7RTS6 562 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 NCOA7Q8NI08 942 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 SCLYQ96I15 445 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 AMNQ9BXJ7 453 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 ALDH8A1Q9H2A2 487 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
CTNNA1-235ENST00000522730 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 SGSM2O43147 1006 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 EDNRBP24530 442 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 DNAJB2P25686 324 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 PBX2P40425 430 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 SART3Q15020 963 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 DEFB128Q7Z7B8 93 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 PIGSQ96S52 555 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 NOD1Q9Y239 953 aa11.9□□□□□ -0.5
CTNNA1-235ENST00000522730 CUL9Q8IWT3 2517 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 PALM3A6NDB9 673 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 A6NJR5 290 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 ZBTB5O15062 677 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 KPNA6O60684 536 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 PPP1R11O60927 126 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 GH1P01241 217 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 NR3C2P08235 984 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 SUPT20HL2P0C7V6 817 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 FOSL2P15408 326 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 GRM4Q14833 912 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 PSRC1Q6PGN9 363 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 IFNLR1Q8IU57 520 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 RPUSD2Q8IZ73 545 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 RETREG2Q8NC44 543 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 TIFAQ96CG3 184 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 IWS1Q96ST2 819 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 SEZ6LQ9BYH1 1024 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 WNT8AQ9H1J5 351 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms