RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 MAF1Q9H063 256 aa13.57□□□□□ -0.24
IGHV3-60-201ENST00000521678 EPHX3Q9H6B9 360 aa13.57□□□□□ -0.24
IGHV3-60-201ENST00000521678 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
IGHV3-60-201ENST00000521678 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 KIF28PB7ZC32 967 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 SNHG28P0DPA3 235 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 PDE4DQ08499 809 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 SLC30A10Q6XR72 485 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 SESTD1Q86VW0 696 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 COPS5Q92905 334 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 TTC14Q96N46 770 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 WDR19Q8NEZ3 1342 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 SCN10AQ9Y5Y9 1956 aa13.56□□□□□ -0.24
IGHV3-60-201ENST00000521678 GBF1Q92538 1859 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 ARIH2O95376 493 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 FGAP02671 866 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 PDHBP11177 359 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 CALML3P27482 149 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 RBL2Q08999 1139 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 ZNF543Q08ER8 600 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 GRB10Q13322 594 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 SKIV2LQ15477 1246 aaKnown RBP13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 FAM47CQ5HY64 1035 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 HLA-CQ95604 372 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 FTOQ9C0B1 505 aaKnown RBP eCLIP13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 MTMR7Q9Y216 660 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 RAD50Q92878 1312 aa13.55□□□□□ -0.24
IGHV3-60-201ENST00000521678 LCTP09848 1927 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 B4DLN1 442 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 MX1P20591 662 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 MRPL12P52815 198 aaKnown RBP13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 SPRED2Q7Z698 418 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 KAT2BQ92831 832 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 MPHOSPH6Q99547 160 aaKnown RBP13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 HELLSQ9NRZ9 838 aa13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 TCF20Q9UGU0 1960 aaKnown RBP13.54□□□□□ -0.24
IGHV3-60-201ENST00000521678 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
IGHV3-60-201ENST00000521678 CXCL10P02778 98 aa13.53□□□□□ -0.24
IGHV3-60-201ENST00000521678 PTGISQ16647 500 aa13.53□□□□□ -0.24
IGHV3-60-201ENST00000521678 AFG1LQ8WV93 481 aa13.53□□□□□ -0.24
IGHV3-60-201ENST00000521678 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
IGHV3-60-201ENST00000521678 FRMPD2Q68DX3 1309 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-60-201ENST00000521678 TET1Q8NFU7 2136 aa13.52□□□□□ -0.24
IGHV3-60-201ENST00000521678 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.24
IGHV3-60-201ENST00000521678 LCHNA4D1U4 455 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 GPR37L1O60883 481 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 SELPP16109 830 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 WDR5P61964 334 aaKnown RBP13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 ARHGAP1Q07960 439 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 GDF6Q6KF10 455 aaPredicted RBP13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 DHX38Q92620 1227 aaKnown RBP13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 RAD9AQ99638 391 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 C11orf16Q9NQ32 467 aa13.52□□□□□ -0.25
IGHV3-60-201ENST00000521678 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 ABHD14A-ACY1A0A1B0GW23 586 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 NBNO60934 754 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 PCP11498 1178 aaKnown RBP13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 KCNJ6P48051 423 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 ERVK-21P61565 698 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 TMEM31Q5JXX7 168 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 DIEXFQ68CQ4 756 aaKnown RBP13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 TRAF7Q6Q0C0 670 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 SYTL5Q8TDW5 730 aaPredicted RBP13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 SCN5AQ14524 2016 aa13.51□□□□□ -0.25
IGHV3-60-201ENST00000521678 PI4K2BG5E9Z4 385 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 GJB5O95377 273 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 GH1P01241 217 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 MMP3P08254 477 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 CKBP12277 381 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 LY6KQ17RY6 165 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 TRIM71Q2Q1W2 868 aaKnown RBP13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 MCMDC2Q4G0Z9 681 aa13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
IGHV3-60-201ENST00000521678 CNKSR3Q6P9H4 555 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms