RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 EIF5BO60841 1220 aaKnown RBP11.87□□□□□ -0.51
TRIM35-204ENST00000521283 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
TRIM35-204ENST00000521283 CALM1P0DP23 149 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 CALM2P0DP24 149 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 CALM3P0DP25 149 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 KRT32Q14532 448 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 C1orf53Q5VUE5 145 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 ARMCX2Q7L311 632 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 ADGRF4Q8IZF3 695 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 PCSK9Q8NBP7 692 aaKnown RBP11.87□□□□□ -0.51
TRIM35-204ENST00000521283 LZTS2Q9BRK4 669 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
TRIM35-204ENST00000521283 ANO2Q9NQ90 1003 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 MRPL11Q9Y3B7 192 aaKnown RBP11.87□□□□□ -0.51
TRIM35-204ENST00000521283 Q9Y3F1 56 aa11.87□□□□□ -0.51
TRIM35-204ENST00000521283 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 H0YGN5 161 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
TRIM35-204ENST00000521283 SNAI1O95863 264 aaPredicted RBP11.86□□□□□ -0.51
TRIM35-204ENST00000521283 HMGB1P09429 215 aaKnown RBP11.86□□□□□ -0.51
TRIM35-204ENST00000521283 KIF5BP33176 963 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 GNAQP50148 359 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 LRRC41Q15345 812 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 TSGA10IPQ3SY00 556 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 IQSEC1Q6DN90 963 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 DIS3LQ8TF46 1054 aaKnown RBP11.86□□□□□ -0.51
TRIM35-204ENST00000521283 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 SENP6Q9GZR1 1112 aaPredicted RBP11.86□□□□□ -0.51
TRIM35-204ENST00000521283 VTA1Q9NP79 307 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 MCM3APO60318 1980 aa11.86□□□□□ -0.51
TRIM35-204ENST00000521283 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-204ENST00000521283 DDAH1O94760 285 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 CST5P28325 142 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-204ENST00000521283 LIFRP42702 1097 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 NKX3-2P78367 333 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-204ENST00000521283 PRAMEF19Q5SWL8 479 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 CYB5R4Q7L1T6 521 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 FBXO11Q86XK2 927 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-204ENST00000521283 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 PRKAG2Q9UGJ0 569 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 ZHX1Q9UKY1 873 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-204ENST00000521283 PHF24Q9UPV7 400 aa11.85□□□□□ -0.51
TRIM35-204ENST00000521283 ALPK3Q96L96 1907 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 SLC27A2O14975 620 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 ZBTB5O15062 677 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRIM35-204ENST00000521283 ZEB2O60315 1214 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CABYRO75952 493 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 REC8O95072 547 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 GJA9P57773 515 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CNTN2Q02246 1040 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 TROAPQ12815 778 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 BAATQ14032 418 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-204ENST00000521283 GRM4Q14833 912 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 GJC2Q5T442 439 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CREB3L3Q68CJ9 461 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-204ENST00000521283 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CHMP4CQ96CF2 233 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 MTMR8Q96EF0 704 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 IWS1Q96ST2 819 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 RIOX1Q9H6W3 641 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 ELP1O95163 1332 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 MROH7Q68CQ1 1323 aa11.84□□□□□ -0.51
TRIM35-204ENST00000521283 CCDC69A6NI79 296 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 PRC1O43663 620 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 BMP8BP34820 402 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 ALDH5A1P51649 535 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-204ENST00000521283 SNAP25P60880 206 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
TRIM35-204ENST00000521283 GHRHRQ02643 423 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 TNFAIP2Q03169 654 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 PTGDRQ13258 359 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 SNX17Q15036 470 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 PPP2R5BQ15173 497 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-204ENST00000521283 SLC39A5Q6ZMH5 540 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 KLHDC9Q8NEP7 349 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
TRIM35-204ENST00000521283 CLEC4DQ8WXI8 215 aa11.83□□□□□ -0.52
TRIM35-204ENST00000521283 FGD4Q96M96 766 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms