RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 KIAA1755Q5JYT7 1200 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 ADGRD2Q7Z7M1 963 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 TSPYL6Q8N831 410 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 ADAM32Q8TC27 787 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 NSUN4Q96CB9 384 aaKnown RBP10.74□□□□□ -0.69
PVT1-210ENST00000521122 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 SUCLG2Q96I99 432 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 CABP5Q9NP86 173 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 PARD6AQ9NPB6 346 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 RWDD3Q9Y3V2 267 aa10.74□□□□□ -0.69
PVT1-210ENST00000521122 KALRNO60229 2985 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 LGR5O75473 907 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 LINC00271P0C7V0 271 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 RBM25P49756 843 aaKnown RBP10.73□□□□□ -0.69
PVT1-210ENST00000521122 GNAI1P63096 354 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 CERKLQ49MI3 558 aaPredicted RBP10.73□□□□□ -0.69
PVT1-210ENST00000521122 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 TGFBRAP1Q8WUH2 860 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 TOP1MTQ969P6 601 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 MTG1Q9BT17 334 aaPredicted RBP10.73□□□□□ -0.69
PVT1-210ENST00000521122 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
PVT1-210ENST00000521122 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
PVT1-210ENST00000521122 FOCADQ5VW36 1801 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 C2CD4DB7Z1M9 353 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 VWA5AO00534 786 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 ASGR2P07307 311 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 ATP2B3Q16720 1220 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 RABL6Q3YEC7 729 aaPredicted RBP10.72□□□□□ -0.69
PVT1-210ENST00000521122 FIBCD1Q8N539 461 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 REPS2Q8NFH8 660 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 ERVK-5Q9HDB9 667 aa10.72□□□□□ -0.69
PVT1-210ENST00000521122 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
PVT1-210ENST00000521122 SEPT2Q15019 361 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 PTGISQ16647 500 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 IQSEC1Q6DN90 963 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 RBM23Q86U06 439 aaKnown RBP10.71□□□□□ -0.69
PVT1-210ENST00000521122 C1orf210Q8IVY1 113 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 FAM133AQ8N9E0 248 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 ATP8B4Q8TF62 1192 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 PPP1R13LQ8WUF5 828 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 DHX38Q92620 1227 aaKnown RBP10.71□□□□□ -0.69
PVT1-210ENST00000521122 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 CTAGE1Q96RT6 745 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 TMEM121BQ9BXQ6 578 aaPredicted RBP10.71□□□□□ -0.69
PVT1-210ENST00000521122 S1PR5Q9H228 398 aa10.71□□□□□ -0.69
PVT1-210ENST00000521122 SAP30BPQ9UHR5 308 aaKnown RBP10.71□□□□□ -0.69
PVT1-210ENST00000521122 SMG5Q9UPR3 1016 aaKnown RBP10.71□□□□□ -0.69
PVT1-210ENST00000521122 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.7
PVT1-210ENST00000521122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.7□□□□□ -0.7
PVT1-210ENST00000521122 MYL3P08590 195 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 CKBP12277 381 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 PLCG2P16885 1265 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 TBC1D8BQ0IIM8 1120 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 TMEM63BQ5T3F8 832 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 CCDC102BQ68D86 513 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
PVT1-210ENST00000521122 SIX5Q8N196 739 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 NOL10Q9BSC4 688 aaKnown RBP10.7□□□□□ -0.7
PVT1-210ENST00000521122 TEX13BQ9BXU2 312 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
PVT1-210ENST00000521122 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
PVT1-210ENST00000521122 CACNA2D2Q9NY47 1150 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 PLAGL2Q9UPG8 496 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.7□□□□□ -0.7
PVT1-210ENST00000521122 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
PVT1-210ENST00000521122 EYA2O00167 538 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 WDR46O15213 610 aaKnown RBP10.69□□□□□ -0.7
PVT1-210ENST00000521122 UPP2O95045 317 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 DNAJB1P25685 340 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 CPT1AP50416 773 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
PVT1-210ENST00000521122 IL17RAQ96F46 866 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 PLVAPQ9BX97 442 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 EHD4Q9H223 541 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 EPC1Q9H2F5 836 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 PDGFCQ9NRA1 345 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 FBXO28Q9NVF7 368 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 AATFQ9NY61 560 aaKnown RBP eCLIP10.69□□□□□ -0.7
PVT1-210ENST00000521122 SERPINB13Q9UIV8 391 aa10.69□□□□□ -0.7
PVT1-210ENST00000521122 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 EIF4E1BA6NMX2 242 aaKnown RBP10.68□□□□□ -0.7
PVT1-210ENST00000521122 F6X3S4 739 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 RBAK-RBAKDNI3L0D1 243 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 BAG3O95817 575 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
PVT1-210ENST00000521122 MBTPS1Q14703 1052 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 ZNF528Q3MIS6 628 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 SNRNP48Q6IEG0 339 aaKnown RBP10.68□□□□□ -0.7
PVT1-210ENST00000521122 TAPT1Q6NXT6 567 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 TRAF7Q6Q0C0 670 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 CCDC146Q8IYE0 955 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 ANKRD35Q8N283 1001 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 ANKRD44Q8N8A2 993 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 DBF4BQ8NFT6 615 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 P2RX5Q93086 422 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 GPR108Q9NPR9 543 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 FBXL21Q9UKT6 434 aa10.68□□□□□ -0.7
PVT1-210ENST00000521122 PPP1R9AQ9ULJ8 1098 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms