RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
TNPO1-212ENST00000520850 CCDC82Q8N4S0 544 aa18.78■□□□□ 0.6
TNPO1-212ENST00000520850 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
TNPO1-212ENST00000520850 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
TNPO1-212ENST00000520850 C11orf49Q9H6J7 331 aa18.78■□□□□ 0.6
TNPO1-212ENST00000520850 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
TNPO1-212ENST00000520850 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
TNPO1-212ENST00000520850 MEIS2O14770 477 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.62e-7■□□□□ 9.5
TNPO1-212ENST00000520850 EIF3JO75822 258 aaKnown RBP18.77■□□□□ 0.6
TNPO1-212ENST00000520850 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
TNPO1-212ENST00000520850 DUSP28Q4G0W2 176 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 ARHGEF16Q5VV41 709 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 VSIG10LQ86VR7 867 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 CUL5Q93034 780 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 RNF26Q9BY78 433 aaPredicted RBP18.77■□□□□ 0.6
TNPO1-212ENST00000520850 PSTPIP2Q9H939 334 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 SPC25Q9HBM1 224 aa18.77■□□□□ 0.6
TNPO1-212ENST00000520850 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 STAM2O75886 525 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 NR3C2P08235 984 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 PFKFB3Q16875 520 aaPredicted RBP18.76■□□□□ 0.59
TNPO1-212ENST00000520850 C1orf53Q5VUE5 145 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
TNPO1-212ENST00000520850 XRRA1Q6P2D8 792 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 FAM177A1Q8N128 213 aaPredicted RBP18.76■□□□□ 0.59
TNPO1-212ENST00000520850 SCFD2Q8WU76 684 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 PDCD2LQ9BRP1 358 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 BARHL2Q9NY43 387 aa18.76■□□□□ 0.59
TNPO1-212ENST00000520850 MOXD2PA6NHM9 499 aa18.75■□□□□ 0.59
TNPO1-212ENST00000520850 KBTBD13C9JR72 458 aa18.75■□□□□ 0.59
TNPO1-212ENST00000520850 ADCYAP1R1P41586 468 aa18.75■□□□□ 0.59
TNPO1-212ENST00000520850 RBM25P49756 843 aaKnown RBP18.75■□□□□ 0.59
TNPO1-212ENST00000520850 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
TNPO1-212ENST00000520850 PCSK9Q8NBP7 692 aaKnown RBP18.75■□□□□ 0.59
TNPO1-212ENST00000520850 DIS3LQ8TF46 1054 aaKnown RBP18.75■□□□□ 0.59
TNPO1-212ENST00000520850 PIBF1Q8WXW3 757 aa18.75■□□□□ 0.59
TNPO1-212ENST00000520850 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
TNPO1-212ENST00000520850 PHF24Q9UPV7 400 aa18.75■□□□□ 0.59
TNPO1-212ENST00000520850 SYNRGQ9UMZ2 1314 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 ADCY6O43306 1168 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 TGFB3P10600 412 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 SMPD1P17405 629 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 HOXA13P31271 388 aaPredicted RBP18.74■□□□□ 0.59
TNPO1-212ENST00000520850 PGM5Q15124 567 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 GJC2Q5T442 439 aaPredicted RBP18.74■□□□□ 0.59
TNPO1-212ENST00000520850 ANO1Q5XXA6 986 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 FBXO16Q8IX29 292 aaPredicted RBP18.74■□□□□ 0.59
TNPO1-212ENST00000520850 WDR11Q9BZH6 1224 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 RIC8AQ9NPQ8 531 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
TNPO1-212ENST00000520850 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.73■□□□□ 0.59
TNPO1-212ENST00000520850 ESYT2A0FGR8 921 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 CTAGE5O15320 804 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 PGK1P00558 417 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 SCG2P13521 617 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 TTLL4Q14679 1199 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 PKN1Q16512 942 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 WWC2Q6AWC2 1192 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 MCTP2Q6DN12 878 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 CCDC62Q6P9F0 684 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 CPLX2Q6PUV4 134 aaKnown RBP18.73■□□□□ 0.59
TNPO1-212ENST00000520850 EEPD1Q7L9B9 569 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 HEATR3Q7Z4Q2 680 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 SMARCC2Q8TAQ2 1214 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 CCDC12Q8WUD4 166 aaPredicted RBP18.73■□□□□ 0.59
TNPO1-212ENST00000520850 LRRC37A2A6NM11 1700 aa18.73■□□□□ 0.59
TNPO1-212ENST00000520850 hCG_1642624A0A1W2PR95 340 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 STXBP3O00186 592 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 PFKFB2O60825 505 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
TNPO1-212ENST00000520850 NEK4P51957 841 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 AKAP17AQ02040 695 aaKnown RBP18.72■□□□□ 0.59
TNPO1-212ENST00000520850 SNX17Q15036 470 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 USP17L6PQ6QN14 398 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 SEZ6LQ9BYH1 1024 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
TNPO1-212ENST00000520850 ZMYND12Q9H0C1 365 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 AP5M1Q9H0R1 490 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 SH3GLB2Q9NR46 395 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 GTF3C3Q9Y5Q9 886 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 NR2E3Q9Y5X4 410 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 ELP1O95163 1332 aa18.72■□□□□ 0.59
TNPO1-212ENST00000520850 ZEB2O60315 1214 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
TNPO1-212ENST00000520850 CCND2P30279 289 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 AK2P54819 239 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 NAPAP54920 295 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 CCT2P78371 535 aaKnown RBP18.71■□□□□ 0.59
TNPO1-212ENST00000520850 GNASQ5JWF2 1037 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 PCNX4Q63HM2 1172 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 TLK2Q86UE8 772 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 FCHSD1Q86WN1 690 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 TRIM22Q8IYM9 498 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 KIF2CQ99661 725 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 SLKQ9H2G2 1235 aaPredicted RBP18.71■□□□□ 0.59
TNPO1-212ENST00000520850 TPCN1Q9ULQ1 816 aa18.71■□□□□ 0.59
TNPO1-212ENST00000520850 DDX49Q9Y6V7 483 aaKnown RBP18.71■□□□□ 0.59
TNPO1-212ENST00000520850 SMCO2A6NFE2 343 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms