RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 BMP8AQ7Z5Y6 402 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 ADHFE1Q8IWW8 467 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 COPS5Q92905 334 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 WNT8BQ93098 351 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 MRPL38Q96DV4 380 aaKnown RBP9.55□□□□□ -0.88
CSMD1-209ENST00000520630 CCDC136Q96JN2 1154 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 RAD9AQ99638 391 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 ACAD9Q9H845 621 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 RNF146Q9NTX7 359 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 CLIP2Q9UDT6 1046 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 PRKAG3Q9UGI9 489 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 RGS20O76081 388 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 CTC1Q2NKJ3 1217 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-209ENST00000520630 FAM117BQ6P1L5 589 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 AACSQ86V21 672 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 RNF135Q8IUD6 432 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 STK11IPQ8N1F8 1099 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 SP7Q8TDD2 431 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-209ENST00000520630 PABPC5Q96DU9 382 aaKnown RBP9.54□□□□□ -0.88
CSMD1-209ENST00000520630 MFSD14AQ96MC6 490 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 MTG1Q9BT17 334 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-209ENST00000520630 OSBPL7Q9BZF2 842 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 PUS7LQ9H0K6 701 aaKnown RBP9.54□□□□□ -0.88
CSMD1-209ENST00000520630 VTA1Q9NP79 307 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 FEM1BQ9UK73 627 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
CSMD1-209ENST00000520630 A6NJR5 290 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 GFRA3O60609 400 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 LGR5O75473 907 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 IGHDP01880 384 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 KCNJ6P48051 423 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 RBL2Q08999 1139 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 HIC1Q14526 733 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 TTF1Q15361 905 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 SMAD2Q15796 467 aaKnown RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 TRIM71Q2Q1W2 868 aaKnown RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 PUS10Q3MIT2 529 aaKnown RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 FAM47CQ5HY64 1035 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 CNKSR3Q6P9H4 555 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 LRRC47Q8N1G4 583 aaKnown RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 KAT2BQ92831 832 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 EDAQ92838 391 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 CHMP4CQ96CF2 233 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 CEP95Q96GE4 821 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 WDR11Q9BZH6 1224 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
CSMD1-209ENST00000520630 IL1RAPL2Q9NP60 686 aa9.53□□□□□ -0.88
CSMD1-209ENST00000520630 WDR81Q562E7 1941 aa9.52□□□□□ -0.88
CSMD1-209ENST00000520630 GSG1L2A8MUP6 293 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 TMEM232C9JQI7 657 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 MBTPS2O43462 519 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 ARIH2O95376 493 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 LINC00271P0C7V0 271 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 CKBP12277 381 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 ALAS1P13196 640 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 GTF2F1P35269 517 aaKnown RBP eCLIP9.52□□□□□ -0.89
CSMD1-209ENST00000520630 ALDH5A1P51649 535 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-209ENST00000520630 PTPN5P54829 565 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 VCPP55072 806 aaKnown RBP9.52□□□□□ -0.89
CSMD1-209ENST00000520630 PTPN11Q06124 597 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-209ENST00000520630 LRRFIP1Q32MZ4 808 aaKnown RBP9.52□□□□□ -0.89
CSMD1-209ENST00000520630 EPC2Q52LR7 807 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 SBK1Q52WX2 424 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 BANK1Q8NDB2 785 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 GMCL1P1Q8NEA9 526 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 OR6J1Q8NGC5 347 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 DNAJC2Q99543 621 aaKnown RBP9.52□□□□□ -0.89
CSMD1-209ENST00000520630 ZBED2Q9BTP6 218 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 MTMR4Q9NYA4 1195 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 SLC4A4Q9Y6R1 1079 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 ZFHX4Q86UP3 3567 aa9.52□□□□□ -0.89
CSMD1-209ENST00000520630 EVPLQ92817 2033 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 ABHD14A-ACY1A0A1B0GW23 586 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 TMEM221A6NGB7 291 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 H3BNC9 293 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 M0R296 226 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 TBX10O75333 385 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 BMP3P12645 472 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 SELPP16109 830 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 CPT1AP50416 773 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 FOXK2Q01167 660 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 BFSP2Q13515 415 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 CLUL1Q15846 466 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 PTGISQ16647 500 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 SLFN13Q68D06 897 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 LRRC8DQ7L1W4 858 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 ASCL5Q7RTU5 278 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 RPAINQ86UA6 219 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 SESTD1Q86VW0 696 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 SIRT2Q8IXJ6 389 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 RPAP2Q8IXW5 612 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms