RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 IRS4O14654 1257 aaPredicted RBP6.13□□□□□ -1.43
SQLE-204ENST00000520493 NPHS1O60500 1241 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
SQLE-204ENST00000520493 AFF3P51826 1226 aaKnown RBP6.13□□□□□ -1.43
SQLE-204ENST00000520493 ZNF200P98182 395 aaPredicted RBP6.13□□□□□ -1.43
SQLE-204ENST00000520493 EFEMP1Q12805 493 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 FXNQ16595 210 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 CNKSR3Q6P9H4 555 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 NLGN1Q8N2Q7 840 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 HIRIP3Q9BW71 556 aaPredicted RBP6.13□□□□□ -1.43
SQLE-204ENST00000520493 LRP2BPQ9P2M1 347 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 MYRFQ9Y2G1 1151 aa6.13□□□□□ -1.43
SQLE-204ENST00000520493 DDAH1O94760 285 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 DNAJA1P31689 397 aaKnown RBP6.12□□□□□ -1.43
SQLE-204ENST00000520493 SCRN1Q12765 414 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 SV2CQ496J9 727 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 C6orf15Q6UXA7 325 aaPredicted RBP6.12□□□□□ -1.43
SQLE-204ENST00000520493 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 IGDCC3Q8IVU1 814 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 TRIM59Q8IWR1 403 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 FAM178BQ8IXR5 827 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 PANK1Q8TE04 598 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 PEX11GQ96HA9 241 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 ADAM7Q9H2U9 754 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 FAN1Q9Y2M0 1017 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 RWDD3Q9Y3V2 267 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 PCDHA5Q9Y5H7 936 aa6.12□□□□□ -1.43
SQLE-204ENST00000520493 FGRP09769 529 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 GLI4P10075 376 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 NCKAP1LP55160 1127 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 PRR5P85299 388 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 GTF2IRD2BQ6EKJ0 949 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 GTF2IRD2Q86UP8 949 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
SQLE-204ENST00000520493 NETO2Q8NC67 525 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 RNF38Q9H0F5 515 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 CYP26B1Q9NR63 512 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 CLEC1BQ9P126 229 aa6.11□□□□□ -1.43
SQLE-204ENST00000520493 ZC3H12DA2A288 527 aaKnown RBP6.1□□□□□ -1.43
SQLE-204ENST00000520493 AGRPO00253 132 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 PLS3P13797 630 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 ZXDAP98168 799 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 SLC9A5Q14940 896 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 IQCEQ6IPM2 695 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 EEPD1Q7L9B9 569 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
SQLE-204ENST00000520493 FAM129CQ86XR2 697 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 ALG3Q92685 438 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 COPS5Q92905 334 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 DACT3Q96B18 629 aaPredicted RBP6.1□□□□□ -1.43
SQLE-204ENST00000520493 PWWP2AQ96N64 755 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 MMP19Q99542 508 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 BDH2Q9BUT1 245 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 NKX2-4Q9H2Z4 354 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.1□□□□□ -1.433e-7■■■■□ 26.4
SQLE-204ENST00000520493 GULP1Q9UBP9 304 aa6.1□□□□□ -1.43
SQLE-204ENST00000520493 IRS2Q9Y4H2 1338 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 C7orf72A4D263 438 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 SUSD5O60279 629 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 NCAM1P13591 858 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 GTF2F1P35269 517 aaKnown RBP eCLIP6.09□□□□□ -1.43
SQLE-204ENST00000520493 ETFBP38117 255 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 VMACQ2NL98 169 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 NBPF6Q5VWK0 638 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 WWC2Q6AWC2 1192 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 DPH6Q7L8W6 267 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 MCF2L2Q86YR7 1114 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 NBPF4Q96M43 638 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
SQLE-204ENST00000520493 MYO1BO43795 1136 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 FUCA1P04066 466 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 THBDP07204 575 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 SNRPB2P08579 225 aaKnown RBP6.08□□□□□ -1.44
SQLE-204ENST00000520493 HOXC12P31275 282 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 DCP2Q8IU60 420 aaKnown RBP6.08□□□□□ -1.44
SQLE-204ENST00000520493 SP8Q8IXZ3 490 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 TMEFF1Q8IYR6 380 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 SYT8Q8NBV8 401 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 BTN2A2Q8WVV5 523 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 TSPAN17Q96FV3 270 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 CCDC140Q96MF4 163 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 TEPSINQ96N21 525 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 PUS7Q96PZ0 661 aaKnown RBP6.08□□□□□ -1.44
SQLE-204ENST00000520493 MTA3Q9BTC8 594 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 EPN3Q9H201 632 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 ZNF408Q9H9D4 720 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 HCFC2Q9Y5Z7 792 aa6.08□□□□□ -1.44
SQLE-204ENST00000520493 CADPSQ9ULU8 1353 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 B2RBV5 119 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 STK10O94804 968 aaKnown RBP6.07□□□□□ -1.44
SQLE-204ENST00000520493 CPP00450 1065 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 HSP90B1P14625 803 aaKnown RBP6.07□□□□□ -1.44
SQLE-204ENST00000520493 IGFBP6P24592 240 aaPredicted RBP6.07□□□□□ -1.44
SQLE-204ENST00000520493 KCNAB2Q13303 367 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 E4F1Q66K89 784 aaPredicted RBP6.07□□□□□ -1.44
SQLE-204ENST00000520493 ZNF227Q86WZ6 799 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 LNPKQ9C0E8 428 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 AP5M1Q9H0R1 490 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms