RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 KLHDC9Q8NEP7 349 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 STAG1Q8WVM7 1258 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 FGD4Q96M96 766 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 HELLSQ9NRZ9 838 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 FBXO40Q9UH90 709 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 CNPY2Q9Y2B0 182 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 CTDP1Q9Y5B0 961 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 PCDHB9Q9Y5E1 797 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 SYNGAP1Q96PV0 1343 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 TRIM43BA6NCK2 446 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 PIK3CDO00329 1044 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 ORC4O43929 436 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 MCCP23508 829 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 SLC1A4P43007 532 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 TLE2Q04725 743 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 RCSD1Q6JBY9 416 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 FAM160B2Q86V87 743 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 DEFB123Q8N688 67 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 CHURC1Q8WUH1 139 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 TRIM43Q96BQ3 446 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 LENG1Q96BZ8 264 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 FAM227BQ96M60 508 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 OCSTAMPQ9BR26 566 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 TSEN34Q9BSV6 310 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 PRKAG2Q9UGJ0 569 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 FAM184BQ9ULE4 1060 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 ZNF536O15090 1300 aa10.97□□□□□ -0.65
CTNNA1-221ENST00000520339 ZNF236Q9UL36 1845 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 A0A0G2JMZ2 1700 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 TSPY2A6NKD2 308 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 NMT2O60551 498 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 S1PR4O95977 384 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 FGAP02671 866 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 STAT2P52630 851 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 PDE4CQ08493 712 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 AAMPQ13685 434 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 ACVR2BQ13705 512 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 MCMDC2Q4G0Z9 681 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 CCSAPQ6IQ19 270 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 Q7L0L9 218 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 SMC5Q8IY18 1101 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 ANKRD35Q8N283 1001 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 PDLIM7Q9NR12 457 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 ZHX1Q9UKY1 873 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 STX8Q9UNK0 236 aa10.96□□□□□ -0.65
CTNNA1-221ENST00000520339 A0A0D9SFI3 127 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 A0A1W2PQ45 241 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 A0A1W2PQY0 241 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 RANBP6O60518 1105 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 DUSP11O75319 330 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 SKIP12755 728 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 CNTN2Q02246 1040 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 KCNA10Q16322 511 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 TKFCQ3LXA3 575 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 KCTD1Q719H9 257 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 ARMCX2Q7L311 632 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 ZBTB33Q86T24 672 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 BADQ92934 168 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 KATNBL1Q9H079 304 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 ABHD16BQ9H3Z7 469 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 ACAD9Q9H845 621 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 A1CFQ9NQ94 594 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 PRDM5Q9NQX1 630 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 BAZ2AQ9UIF9 1905 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-221ENST00000520339 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 MYADML2A6NDP7 307 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 KIAA0355O15063 1070 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 ADCY6O43306 1168 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 ITGB8P26012 769 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 CST5P28325 142 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 ACLYP53396 1101 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 SNAP25P60880 206 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 NKX3-2P78367 333 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 NMIQ13287 307 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 SHHQ15465 462 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 C9orf50Q5SZB4 431 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 FAM109BQ6ICB4 259 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 ANKRD33Q7Z3H0 272 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 ZNF589Q86UQ0 364 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 DCAF4Q8WV16 495 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 TOX2Q96NM4 488 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 TRERF1Q96PN7 1200 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 UPF3AQ9H1J1 476 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 HOMER2Q9NSB8 354 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 RNF146Q9NTX7 359 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms