RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 OR6J1Q8NGC5 347 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 CUL5Q93034 780 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-221ENST00000520265 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
VEGFA-221ENST00000520265 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
VEGFA-221ENST00000520265 LOC102724159A0A0B4J2E5 919 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 PSMA5P28066 241 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 MDM2Q00987 491 aaPredicted RBP16.37■□□□□ 0.21
VEGFA-221ENST00000520265 PWP2Q15269 919 aaKnown RBP16.37■□□□□ 0.21
VEGFA-221ENST00000520265 STXBP2Q15833 593 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 HEATR3Q7Z4Q2 680 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
VEGFA-221ENST00000520265 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 MORC4Q8TE76 937 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 SCFD2Q8WU76 684 aa16.37■□□□□ 0.21
VEGFA-221ENST00000520265 CEP290O15078 2479 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 MYL3P08590 195 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 TXNP10599 105 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 MAGEA10P43363 369 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 APOBRQ0VD83 1088 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 TSGA10IPQ3SY00 556 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 HABP4Q5JVS0 413 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 TMEM63BQ5T3F8 832 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 CXCL17Q6UXB2 119 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 TMTC3Q6ZXV5 915 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 BRF1Q92994 677 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 UPF3AQ9H1J1 476 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 PXMP2Q9NR77 195 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
VEGFA-221ENST00000520265 GNEQ9Y223 722 aaKnown RBP16.36■□□□□ 0.21
VEGFA-221ENST00000520265 OPLAHO14841 1288 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 EDNRBP24530 442 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
VEGFA-221ENST00000520265 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
VEGFA-221ENST00000520265 HSD17B4P51659 736 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 TLE2Q04725 743 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 COPS5Q92905 334 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 IWS1Q96ST2 819 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 UBE2OQ9C0C9 1292 aaKnown RBP16.35■□□□□ 0.21
VEGFA-221ENST00000520265 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
VEGFA-221ENST00000520265 A0A0U1RQG5 324 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-221ENST00000520265 SORBS3O60504 671 aa16.34■□□□□ 0.21
VEGFA-221ENST00000520265 NR3C2P08235 984 aa16.34■□□□□ 0.21
VEGFA-221ENST00000520265 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
VEGFA-221ENST00000520265 CPT1AP50416 773 aa16.34■□□□□ 0.21
VEGFA-221ENST00000520265 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.219e-7■□□□□ 11
VEGFA-221ENST00000520265 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-221ENST00000520265 MAF1Q9H063 256 aa16.34■□□□□ 0.21
VEGFA-221ENST00000520265 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
VEGFA-221ENST00000520265 CLTBP09497 229 aa16.33■□□□□ 0.2
VEGFA-221ENST00000520265 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
VEGFA-221ENST00000520265 CCND2P30279 289 aa16.33■□□□□ 0.2
VEGFA-221ENST00000520265 TMEM39AQ9NV64 488 aa16.33■□□□□ 0.2
VEGFA-221ENST00000520265 MAP3K20Q9NYL2 800 aaKnown RBP16.33■□□□□ 0.2
VEGFA-221ENST00000520265 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■□□□□ 8.4
VEGFA-221ENST00000520265 TLR3O15455 904 aaKnown RBP16.32■□□□□ 0.2
VEGFA-221ENST00000520265 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
VEGFA-221ENST00000520265 ARIH2O95376 493 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 NAPAP54920 295 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 PSMC6P62333 389 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 SNX17Q15036 470 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 LY6KQ17RY6 165 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 CCSAPQ6IQ19 270 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-221ENST00000520265 USP17L6PQ6QN14 398 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 DNAH12Q6ZR08 3092 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 KCNB2Q92953 911 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 PDCD2LQ9BRP1 358 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 USP26Q9BXU7 913 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
VEGFA-221ENST00000520265 PDLIM7Q9NR12 457 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 Q9Y3F1 56 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 CYP46A1Q9Y6A2 500 aa16.32■□□□□ 0.2
VEGFA-221ENST00000520265 ELP1O95163 1332 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 CCDC196A0A1B0GTZ2 297 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 CTAGE5O15320 804 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 CABYRO75952 493 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 GH1P01241 217 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 RAG1P15918 1043 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
VEGFA-221ENST00000520265 PGM5Q15124 567 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 UBE2SQ16763 222 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 SAMD3Q8N6K7 520 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 IL31RAQ8NI17 732 aa16.31■□□□□ 0.2
VEGFA-221ENST00000520265 PSTPIP2Q9H939 334 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms