RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 ZNF543Q08ER8 600 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 ITGA7Q13683 1181 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 BAATQ14032 418 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 FSCN1Q16658 493 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 CCDC178Q5BJE1 867 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 GPATCH4Q5T3I0 446 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 SYDE2Q5VT97 1194 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 TTBK2Q6IQ55 1244 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 MFSD6Q6ZSS7 791 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 TLK2Q86UE8 772 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 PDCD7Q8N8D1 485 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 DNERQ8NFT8 737 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 CLEC4DQ8WXI8 215 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 HERVK_113Q902F9 699 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 RNPC3Q96LT9 517 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 FAM227BQ96M60 508 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 AP5M1Q9H0R1 490 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 RWDD1Q9H446 243 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 PDGFCQ9NRA1 345 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 HOMER2Q9NSB8 354 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 ADD3Q9UEY8 706 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 CCPG1Q9ULG6 757 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 A6NJR5 290 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 NKRFO15226 690 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 KPNA6O60684 536 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 CSF2RAP15509 400 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 SDSP20132 328 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 SLC16A2P36021 539 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 ALDH5A1P51649 535 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 BEX3Q00994 111 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 GHRHRQ02643 423 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 NUCB1Q02818 461 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 PTPN11Q06124 597 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 IKQ13123 557 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 NMIQ13287 307 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 PSRC1Q6PGN9 363 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 CXCL17Q6UXB2 119 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 ZNF365Q70YC5 407 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 ZNF589Q86UQ0 364 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 PLEKHM2Q8IWE5 1019 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 MAFAQ8NHW3 353 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 ESR2Q92731 530 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 VWCEQ96DN2 955 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 FAM161BQ96MY7 647 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 NOC4LQ9BVI4 516 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 COL25A1Q9BXS0 654 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 RNF41Q9H4P4 317 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 IL23AQ9NPF7 189 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 RBM19Q9Y4C8 960 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 CCDC171Q6TFL3 1326 aa6.64□□□□□ -1.35
CTNNA1-219ENST00000520158 B4DLN1 442 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 HIP1O00291 1037 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 NFIBO00712 420 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 ZNF213O14771 459 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 B4GALT4O60513 344 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 IGHDP01880 384 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 FGBP02675 491 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 PFKMP08237 780 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 SUPT20HL2P0C7V6 817 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 DNAJB2P25686 324 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 MRPL12P52815 198 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 SNAP25P60880 206 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 PURAQ00577 322 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 GRIN2CQ14957 1233 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 TMEM63BQ5T3F8 832 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 NFRKBQ6P4R8 1299 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 NSMFQ6X4W1 530 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 RNF207Q6ZRF8 634 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 RASGRP2Q7LDG7 609 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 CHD1LQ86WJ1 897 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 CUL9Q8IWT3 2517 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 FBXO16Q8IX29 292 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 RPUSD2Q8IZ73 545 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 SAMD3Q8N6K7 520 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 MYLIPQ8WY64 445 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 VTI1AQ96AJ9 217 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 PURBQ96QR8 312 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 MPHOSPH6Q99547 160 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 DSCC1Q9BVC3 393 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 PBX4Q9BYU1 374 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 WDR11Q9BZH6 1224 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 ALDH8A1Q9H2A2 487 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 HIPK3Q9H422 1215 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 POLR3EQ9NVU0 708 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 SUPT16HQ9Y5B9 1047 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 SCN10AQ9Y5Y9 1956 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 STK24Q9Y6E0 443 aa6.63□□□□□ -1.35
CTNNA1-219ENST00000520158 LAMA4Q16363 1823 aa6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 HOXB3P14651 431 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 FOSL2P15408 326 aa6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 POU3F3P20264 500 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 CYP2C18P33260 490 aa6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 CPT1AP50416 773 aa6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 RPS6P62753 249 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 RAB30Q15771 203 aa6.62□□□□□ -1.35
CTNNA1-219ENST00000520158 CCDC96Q2M329 555 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms