RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 NKRFO15226 690 aaKnown RBP eCLIP21.21■□□□□ 0.99
SREK1-207ENST00000520058 EDNRBP24530 442 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 TTLL4Q14679 1199 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 ANKRD1Q15327 319 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 BRDTQ58F21 947 aaPredicted RBP21.21■□□□□ 0.99
SREK1-207ENST00000520058 CPLX2Q6PUV4 134 aaKnown RBP21.21■□□□□ 0.99
SREK1-207ENST00000520058 HEATR3Q7Z4Q2 680 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 TEX2Q8IWB9 1127 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 WDR11Q9BZH6 1224 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 UPF3BQ9BZI7 483 aaKnown RBP21.21■□□□□ 0.99
SREK1-207ENST00000520058 PXMP2Q9NR77 195 aa21.21■□□□□ 0.99
SREK1-207ENST00000520058 ADAMTS4O75173 837 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 EIF3JO75822 258 aaKnown RBP21.2■□□□□ 0.98
SREK1-207ENST00000520058 EIF2AK2P19525 551 aaKnown RBP21.2■□□□□ 0.98
SREK1-207ENST00000520058 HOXA13P31271 388 aaPredicted RBP21.2■□□□□ 0.98
SREK1-207ENST00000520058 GJA9P57773 515 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 DUSP28Q4G0W2 176 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 GNASQ5JWF2 1037 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 TAPT1Q6NXT6 567 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 TLK2Q86UE8 772 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 GLT8D2Q9H1C3 349 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 PSTPIP2Q9H939 334 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 V9GY48 417 aaPredicted RBP21.2■□□□□ 0.98
SREK1-207ENST00000520058 CNTNAP5Q8WYK1 1306 aa21.2■□□□□ 0.98
SREK1-207ENST00000520058 CPLX1O14810 134 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 OPLAHO14841 1288 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 NR3C2P08235 984 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 CST5P28325 142 aaPredicted RBP21.19■□□□□ 0.98
SREK1-207ENST00000520058 EVCP57679 992 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 CCDC12Q8WUD4 166 aaPredicted RBP21.19■□□□□ 0.98
SREK1-207ENST00000520058 LENG1Q96BZ8 264 aaPredicted RBP21.19■□□□□ 0.98
SREK1-207ENST00000520058 ZNF274Q96GC6 653 aaPredicted RBP21.19■□□□□ 0.98
SREK1-207ENST00000520058 GLT1D1Q96MS3 346 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 UPF3AQ9H1J1 476 aaKnown RBP21.19■□□□□ 0.98
SREK1-207ENST00000520058 EHMT1Q9H9B1 1298 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 PDGFCQ9NRA1 345 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 COL20A1Q9P218 1284 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 PHF24Q9UPV7 400 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 NID2Q14112 1375 aa21.19■□□□□ 0.98
SREK1-207ENST00000520058 RBM47A0AV96 593 aaKnown RBP21.18■□□□□ 0.98
SREK1-207ENST00000520058 PIK3CDO00329 1044 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 TXNP10599 105 aaKnown RBP21.18■□□□□ 0.98
SREK1-207ENST00000520058 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
SREK1-207ENST00000520058 SMPD1P17405 629 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 CDC27P30260 824 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 CCND2P30279 289 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 ADD1P35611 737 aaKnown RBP21.18■□□□□ 0.98
SREK1-207ENST00000520058 NAPAP54920 295 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 PPP1R18Q6NYC8 613 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 KCNV1Q6PIU1 500 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 TRIM22Q8IYM9 498 aa21.18■□□□□ 0.98
SREK1-207ENST00000520058 UPF2Q9HAU5 1272 aaKnown RBP21.18■□□□□ 0.98
SREK1-207ENST00000520058 GNEQ9Y223 722 aaKnown RBP21.18■□□□□ 0.98
SREK1-207ENST00000520058 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.17■□□□□ 0.98
SREK1-207ENST00000520058 hCG_1642624A0A1W2PR95 340 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 DYNC1LI2O43237 492 aaPredicted RBP21.17■□□□□ 0.98
SREK1-207ENST00000520058 STAM2O75886 525 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 PDIA3P30101 505 aaKnown RBP21.17■□□□□ 0.98
SREK1-207ENST00000520058 ACLYP53396 1101 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 KCNA10Q16322 511 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 SEPT14Q6ZU15 432 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 KLHDC9Q8NEP7 349 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 FERMT2Q96AC1 680 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 VTI1AQ96AJ9 217 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 PDCD2LQ9BRP1 358 aa21.17■□□□□ 0.98
SREK1-207ENST00000520058 DDX49Q9Y6V7 483 aaKnown RBP21.17■□□□□ 0.98
SREK1-207ENST00000520058 SPDYE3A6NKU9 549 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 CPT1AP50416 773 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 ATN1P54259 1190 aaPredicted RBP21.16■□□□□ 0.98
SREK1-207ENST00000520058 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
SREK1-207ENST00000520058 TOB2Q14106 344 aaPredicted RBP21.16■□□□□ 0.98
SREK1-207ENST00000520058 PGM5Q15124 567 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 FSCN1Q16658 493 aaKnown RBP21.16■□□□□ 0.98
SREK1-207ENST00000520058 GNPTABQ3T906 1256 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 SLC39A5Q6ZMH5 540 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 C7orf61Q8IZ16 206 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 ALDH8A1Q9H2A2 487 aaPredicted RBP21.16■□□□□ 0.98
SREK1-207ENST00000520058 STARD7Q9NQZ5 370 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 FAM217BQ9NTX9 383 aaPredicted RBP21.16■□□□□ 0.98
SREK1-207ENST00000520058 PRKAG2Q9UGJ0 569 aa21.16■□□□□ 0.98
SREK1-207ENST00000520058 MKI67P46013 3256 aaKnown RBP21.15■□□□□ 0.98
SREK1-207ENST00000520058 A0A1W2PQ45 241 aaPredicted RBP21.15■□□□□ 0.98
SREK1-207ENST00000520058 A0A1W2PQY0 241 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 PRPF3O43395 683 aaKnown RBP21.15■□□□□ 0.98
SREK1-207ENST00000520058 CABYRO75952 493 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 NKX3-2P78367 333 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 PFKFB3Q16875 520 aaPredicted RBP21.15■□□□□ 0.98
SREK1-207ENST00000520058 XRRA1Q6P2D8 792 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 VSIG10LQ86VR7 867 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 OR6J1Q8NGC5 347 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 GPKOWQ92917 476 aaPredicted RBP eCLIP21.15■□□□□ 0.989e-8■■■□□ 15.2
SREK1-207ENST00000520058 RNF26Q9BY78 433 aaPredicted RBP21.15■□□□□ 0.98
SREK1-207ENST00000520058 MRVI1Q9Y6F6 885 aa21.15■□□□□ 0.98
SREK1-207ENST00000520058 ELP1O95163 1332 aa21.14■□□□□ 0.97
SREK1-207ENST00000520058 ADCY6O43306 1168 aa21.14■□□□□ 0.97
SREK1-207ENST00000520058 CDKL5O76039 1030 aa21.14■□□□□ 0.97
SREK1-207ENST00000520058 ASGR1P07306 291 aa21.14■□□□□ 0.97
SREK1-207ENST00000520058 SCG2P13521 617 aa21.14■□□□□ 0.97
SREK1-207ENST00000520058 ADCY7P51828 1080 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms