RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SMARCC1Q92922 1105 aaPredicted RBP5.81□□□□□ -1.48
SDC2-204ENST00000519914 LENG1Q96BZ8 264 aaPredicted RBP5.81□□□□□ -1.48
SDC2-204ENST00000519914 ZNF830Q96NB3 372 aaPredicted RBP5.81□□□□□ -1.48
SDC2-204ENST00000519914 CDC5LQ99459 802 aaKnown RBP5.81□□□□□ -1.48
SDC2-204ENST00000519914 ALG1Q9BT22 464 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 GTPBP4Q9BZE4 634 aaKnown RBP5.81□□□□□ -1.48
SDC2-204ENST00000519914 TRIM5Q9C035 493 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 RNF41Q9H4P4 317 aaPredicted RBP5.81□□□□□ -1.48
SDC2-204ENST00000519914 KLK14Q9P0G3 267 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 CLIP2Q9UDT6 1046 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 NAGPAQ9UK23 515 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 BCS1LQ9Y276 419 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 CLIC4Q9Y696 253 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 SPATA31A5Q5VU36 1347 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 SPATA31A7Q8IWB4 1347 aa5.81□□□□□ -1.48
SDC2-204ENST00000519914 LOC102724428A0A0B4J2F2 783 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 SMTNL1A8MU46 457 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 RANBP6O60518 1105 aaKnown RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 CUTAO60888 179 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 ZNF202O95125 648 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 TUBB4AP04350 444 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CDC27P30260 824 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CRKLP46109 303 aaKnown RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 SIK1P57059 783 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 MLLT1Q03111 559 aaPredicted RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 UBE4AQ14139 1066 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 NCAPHQ15003 741 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 HIF1AQ16665 826 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CCDC144BQ3MJ40 725 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CT47A1Q5JQC4 288 aaPredicted RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 SLC10A5Q5PT55 438 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 NT5DC1Q5TFE4 455 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 KRT40Q6A162 431 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 SYNE3Q6ZMZ3 975 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 VPS37DQ86XT2 251 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 LRRC8AQ8IWT6 810 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CCDC144CPQ8IYA2 1237 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CACTINQ8WUQ7 758 aaKnown RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 ANKRD7Q92527 254 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 GLMNQ92990 594 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 FOXP1Q9H334 677 aaPredicted RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 CCDC9Q9Y3X0 531 aaKnown RBP5.8□□□□□ -1.48
SDC2-204ENST00000519914 TACC3Q9Y6A5 838 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 COL4A1P02462 1669 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 MROH7-TTC4A0A0A0MT08 1334 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 CNTNAP4Q9C0A0 1308 aa5.8□□□□□ -1.48
SDC2-204ENST00000519914 TAF1LQ8IZX4 1826 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 NHSQ6T4R5 1651 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 BAZ2AQ9UIF9 1905 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 CCDC196A0A1B0GTZ2 297 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 GOLGA8AA7E2F4 631 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 BECN2A8MW95 431 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 B4E1Z4 1266 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 KIF2AO00139 706 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 WDHD1O75717 1129 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 IDH1O75874 414 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 MBD4O95243 580 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 MMP1P03956 469 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 SLC3A2P08195 630 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 PFKFB1P16118 471 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 TARSP26639 723 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 IGHMBP2P38935 993 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 IARSP41252 1262 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 CCZ1BP86790 482 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 CCZ1P86791 482 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 GUCY1B3Q02153 619 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 NRG1Q02297 640 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 PLAURQ03405 335 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 CEBPZQ03701 1054 aaKnown RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 DPYDQ12882 1025 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 ITPK1Q13572 414 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 SEC23AQ15436 765 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 RTN1Q16799 776 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 CRTC2Q53ET0 693 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 TMEM67Q5HYA8 995 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 SHC4Q6S5L8 630 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 HFE2Q6ZVN8 426 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 STAG2Q8N3U4 1231 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 MAGEB6Q8N7X4 407 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 SPC24Q8NBT2 197 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 CCDC150Q8NCX0 1101 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 BRIP1Q9BX63 1249 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 RNF26Q9BY78 433 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 NACAP1Q9BZK3 213 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 NAPBQ9H115 298 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 BSDC1Q9NW68 430 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 ZSWIM5Q9P217 1185 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 ZNF652Q9Y2D9 606 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 PAXBP1Q9Y5B6 917 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 MAFBQ9Y5Q3 323 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 LY75O60449 1722 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 COL1A1P02452 1464 aaPredicted RBP5.79□□□□□ -1.48
SDC2-204ENST00000519914 THSD7AQ9UPZ6 1657 aa5.79□□□□□ -1.48
SDC2-204ENST00000519914 A0A1B0GVL5 298 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 TGFBR3LH3BV60 316 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SASH3O75995 380 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 DEXIO95424 95 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 POLR3DP05423 398 aaPredicted RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 SYKP43405 635 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SARSP49591 514 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms