RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 TEX33O43247 280 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 COPB1P53618 953 aaKnown RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 ADKP55263 362 aaKnown RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 USH1GQ495M9 461 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 USP17L6PQ6QN14 398 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 TC2NQ8N9U0 490 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 LRRC15Q8TF66 581 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 THAP9Q9H5L6 903 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 TAB2Q9NYJ8 693 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 PCDHA12Q9UN75 941 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 ITIH6Q6UXX5 1313 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 SPDYE3A6NKU9 549 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 FOSP01100 380 aaPredicted RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 KCNA3P22001 575 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 EEF1GP26641 437 aaKnown RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 HOXA7P31268 230 aaPredicted RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 TRIM14Q14142 442 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 MCM6Q14566 821 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 FKBP1CQ5VVH2 108 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 BTNL9Q6UXG8 535 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 FAM114A1Q8IWE2 563 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 DHX37Q8IY37 1157 aaKnown RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 RAD54LQ92698 747 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 PNMA5Q96PV4 448 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 PANX2Q96RD6 677 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 VPS16Q9H269 839 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 SH2D4AQ9H788 454 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 PIM2Q9P1W9 311 aa9.44□□□□□ -0.9
HMGB4-203ENST00000519684 ZBTB12Q9Y330 459 aaPredicted RBP9.44□□□□□ -0.9
HMGB4-203ENST00000519684 COL4A5P29400 1685 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CNTNAP1P78357 1384 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 TRIM49BA6NDI0 452 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 GOLGA6L9A6NEM1 432 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 SLC26A4O43511 780 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 EDIL3O43854 480 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 PBX1P40424 430 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 STAT2P52630 851 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 SNAP25P60880 206 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 JAG1P78504 1218 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 TMEM119Q4V9L6 283 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 MOXD1Q6UVY6 613 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CNGA4Q8IV77 575 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 P2RX5Q93086 422 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 NAA15Q9BXJ9 866 aaKnown RBP9.43□□□□□ -0.9
HMGB4-203ENST00000519684 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 ZBTB21Q9ULJ3 1066 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 PVALEFA0A1B0GWK0 134 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 LRRC10BA6NIK2 292 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 PES1O00541 588 aaKnown RBP9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CCNE1P24864 410 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 TGFB2P61812 414 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 ARHGAP4P98171 946 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 RBL2Q08999 1139 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 RRP1BQ14684 758 aaKnown RBP9.43□□□□□ -0.9
HMGB4-203ENST00000519684 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 TMEM139Q8IV31 216 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 SPICE1Q8N0Z3 855 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CSGALNACT2Q8N6G5 542 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 MTMR14Q8NCE2 650 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 HAS1Q92839 578 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 SRRTQ9BXP5 876 aaKnown RBP9.43□□□□□ -0.9
HMGB4-203ENST00000519684 BLOC1S4Q9NUP1 217 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 TMX2Q9Y320 296 aa9.43□□□□□ -0.9
HMGB4-203ENST00000519684 CYP3A7-CYP3A51PA0A087WV96 503 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 A0A1W2PRG0 241 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 MEIS2O14770 477 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 TBC1D12O60347 775 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 CYP3A7P24462 503 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 POLD1P28340 1107 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 RBM10P98175 930 aaKnown RBP9.42□□□□□ -0.9
HMGB4-203ENST00000519684 UBXN1Q04323 297 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
HMGB4-203ENST00000519684 CIAPIN1Q6FI81 312 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 JDP2Q8WYK2 163 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 BMP2KQ9NSY1 1161 aaPredicted RBP9.42□□□□□ -0.9
HMGB4-203ENST00000519684 PRR12Q9ULL5 1215 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 PPP2R2CQ9Y2T4 447 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 MYMKA6NI61 221 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 MFAP3LO75121 409 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 IDEP14735 1019 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 ECE1P42892 770 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 FAM83BQ5T0W9 1011 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 DYMQ7RTS9 669 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 MTERF4Q7Z6M4 381 aaKnown RBP9.42□□□□□ -0.9
HMGB4-203ENST00000519684 TEX2Q8IWB9 1127 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 ERMNQ8TAM6 284 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 CHURC1Q8WUH1 139 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 MAP7D2Q96T17 732 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 TAOK3Q9H2K8 898 aa9.42□□□□□ -0.9
HMGB4-203ENST00000519684 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms