RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 WDR11Q9BZH6 1224 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 SLC38A10Q9HBR0 1119 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 RAVER2Q9HCJ3 691 aaKnown RBP5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 INCENPQ9NQS7 918 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 SNRKQ9NRH2 765 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 SMC4Q9NTJ3 1288 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 ADD3Q9UEY8 706 aaKnown RBP5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 FEM1BQ9UK73 627 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 SORCS3Q9UPU3 1222 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 NR2E1Q9Y466 385 aa5.92□□□□□ -1.46
AC055854.1-202ENST00000519624 MAGEB6P1A0A0J9YX57 407 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 NBNO60934 754 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 MMP1P03956 469 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 CKBP12277 381 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 AKR1B1P15121 316 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 CHMP4BP1P59074 171 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 PPP2R5BQ15173 497 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 SIAH1Q8IUQ4 282 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 EFHBQ8N7U6 833 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 TMEM105Q8N8V8 129 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 TOP1MTQ969P6 601 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 IL17RAQ96F46 866 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 KATNAL1Q9BW62 490 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 PLVAPQ9BX97 442 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 PDGFCQ9NRA1 345 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 HOMER2Q9NSB8 354 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 USP15Q9Y4E8 981 aaPredicted RBP5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 PCDHGC5Q9Y5F6 944 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 DMDP11532 3685 aa5.91□□□□□ -1.46
AC055854.1-202ENST00000519624 A6NJR5 290 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 B4DLN1 442 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 F5H6K3 240 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 UPP2O95045 317 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 PDGFBP01127 241 aaPredicted RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 BMPR1AP36894 532 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 ZAP70P43403 619 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 MRPL12P52815 198 aaKnown RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 KLRC3Q07444 240 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 PTK7Q13308 1070 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 ANGPT1Q15389 498 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 RSPO4Q2I0M5 234 aaPredicted RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 NAALADL2Q58DX5 795 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 RPAP2Q8IXW5 612 aaPredicted RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 LRRC47Q8N1G4 583 aaKnown RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 MRPL50Q8N5N7 158 aaKnown RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 C7orf31Q8N865 590 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 KREMEN2Q8NCW0 462 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 SEPT8Q92599 483 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 BORCS6Q96GS4 357 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 RTP3Q9BQQ7 232 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 IFIH1Q9BYX4 1025 aaKnown RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 GPR108Q9NPR9 543 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 A1CFQ9NQ94 594 aaKnown RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 SH2B1Q9NRF2 756 aaPredicted RBP5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 RNF146Q9NTX7 359 aa5.9□□□□□ -1.46
AC055854.1-202ENST00000519624 SMCHD1A6NHR9 2005 aa5.9□□□□□ -1.47
AC055854.1-202ENST00000519624 COL11A1P12107 1806 aaPredicted RBP5.9□□□□□ -1.47
AC055854.1-202ENST00000519624 DNAH14Q0VDD8 3507 aa5.9□□□□□ -1.47
AC055854.1-202ENST00000519624 PLXNA3P51805 1871 aa5.9□□□□□ -1.47
AC055854.1-202ENST00000519624 KMT2EQ8IZD2 1858 aa5.9□□□□□ -1.47
AC055854.1-202ENST00000519624 PRR5-ARHGAP8B1AHC4 643 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 E9PSI1 815 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 GRM6O15303 877 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 LINC01565O15544 149 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 GNAI3P08754 354 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CASTP20810 708 aaKnown RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 STAT2P52630 851 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 ARHGAP8P85298 464 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 PDE4BQ07343 736 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 IKQ13123 557 aaPredicted RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 MTX1Q13505 466 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 GPNMBQ14956 572 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 TTF1Q15361 905 aaPredicted RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CLEC10AQ8IUN9 316 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 FLCNQ8NFG4 579 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 DBF4BQ8NFT6 615 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CYP2W1Q8TAV3 490 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 MORC4Q8TE76 937 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 SCFD2Q8WU76 684 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CHURC1Q8WUH1 139 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 APBB2Q92870 758 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 SECISBP2LQ93073 1101 aaKnown RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 P2RX5Q93086 422 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 TRERF1Q96PN7 1200 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 NEK1Q96PY6 1258 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CDCA3Q99618 268 aaPredicted RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 RIOK1Q9BRS2 568 aaKnown RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 DCP1AQ9NPI6 582 aaPredicted RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 PIH1D3Q9NQM4 214 aaKnown RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 ATP8A2Q9NTI2 1148 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 NYAP2Q9P242 653 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 GTF2IRD1Q9UHL9 959 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CDV3Q9UKY7 258 aaKnown RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 SYNPO2Q9UMS6 1093 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 SIP14410 1827 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 CDK5RAP2Q96SN8 1893 aa5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 KMT2BQ9UMN6 2715 aaPredicted RBP5.89□□□□□ -1.47
AC055854.1-202ENST00000519624 TECTAO75443 2155 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms