RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 BTN2A2Q8WVV5 523 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 KREMEN1Q96MU8 473 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 INTS7Q9NVH2 962 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 PCOLCE2Q9UKZ9 415 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 EID1Q9Y6B2 187 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 PIK3R4Q99570 1358 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 PEAK1Q9H792 1746 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 TTC21BQ7Z4L5 1316 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 SHOXO15266 292 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 GAS2O43903 313 aaKnown RBP6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 BCAR3O75815 825 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 SDSP20132 328 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 POU3F3P20264 500 aaPredicted RBP6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 GRIA2P42262 883 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 AUHQ13825 339 aaKnown RBP6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 LETMD1Q6P1Q0 360 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 TRIM59Q8IWR1 403 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 THEMISQ8N1K5 641 aaPredicted RBP6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 AGGF1Q8N302 714 aaeCLIP6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 ATL2Q8NHH9 583 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 TRIM11Q96F44 468 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 MRGPRX3Q96LB0 322 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 ASPNQ9BXN1 380 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 CGGBP1Q9UFW8 167 aaPredicted RBP6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 NDOR1Q9UHB4 597 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 FBXL21Q9UKT6 434 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 PCDHB12Q9Y5F1 795 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 ANKARQ7Z5J8 1434 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 FMN2Q9NZ56 1722 aa6.05□□□□□ -1.44
CTNNA1-212ENST00000518919 ACEP12821 1306 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 FANCIQ9NVI1 1328 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 ALG1L2C9J202 215 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 FAM229AH3BQW9 127 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 KCNH1O95259 989 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 ELNP15502 786 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 HOXB4P17483 251 aaPredicted RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 IL13P35225 146 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 ETV3P41162 512 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 TMPOP42166 694 aaKnown RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 EXOSC10Q01780 885 aaKnown RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 NBPF9Q3BBW0 867 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 BRDTQ58F21 947 aaPredicted RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 TRIM61Q5EBN2 209 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 NOL9Q5SY16 702 aaKnown RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 IGF2-ASQ6U949 168 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 BRAPQ7Z569 592 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 PPM1KQ8N3J5 372 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 RCC1LQ96I51 464 aaKnown RBP6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 PLVAPQ9BX97 442 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 CEP131Q9UPN4 1083 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 EMC9Q9Y3B6 208 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 DAGLAQ9Y4D2 1042 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 PIK3C2AO00443 1686 aa6.04□□□□□ -1.44
CTNNA1-212ENST00000518919 RGPD1P0DJD0 1748 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 NWD1Q149M9 1564 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 KRBA1A5PL33 1030 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 SART1O43290 800 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 DNAJC8O75937 253 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 C6orf222P0C671 652 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 CPEP16870 476 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 KCNA6P17658 529 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 PMLP29590 882 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 PREPP48147 710 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 RARSP54136 660 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 TRIM28Q13263 835 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 RRS1Q15050 365 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 AFAP1L2Q8N4X5 818 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 LEO1Q8WVC0 666 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 RNF141Q8WVD5 230 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 COG3Q96JB2 828 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 ACSS3Q9H6R3 686 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 NOL6Q9H6R4 1146 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 SLC52A2Q9HAB3 445 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 TRIM39Q9HCM9 518 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 FHOD1Q9Y613 1164 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 USP54Q70EL1 1684 aa6.03□□□□□ -1.44
CTNNA1-212ENST00000518919 MARF1Q9Y4F3 1742 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 IL16Q14005 1332 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 MAPK8IP3Q9UPT6 1336 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 ADGRL3Q9HAR2 1447 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 OPA1O60313 960 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 EFCAB14O75071 495 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 PRKAR2BP31323 418 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 KCNJ6P48051 423 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 USP11P51784 963 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 ZNF445P59923 1031 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 GABREP78334 506 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 PRRT3Q5FWE3 981 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 GTF2IRD2BQ6EKJ0 949 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 CDH24Q86UP0 819 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 GTF2IRD2Q86UP8 949 aa6.02□□□□□ -1.45
CTNNA1-212ENST00000518919 SKAP1Q86WV1 359 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms