RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 PLS1Q14651 629 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 LETM2Q2VYF4 491 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-203ENST00000517921 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 SAMD3Q8N6K7 520 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 PTPN18Q99952 460 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 PAGR1Q9BTK6 254 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 COL20A1Q9P218 1284 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 FBXO2Q9UK22 296 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-203ENST00000517921 MRVI1Q9Y6F6 885 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 FRMPD4Q14CM0 1322 aa12.04□□□□□ -0.48
PABPC1-203ENST00000517921 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 MANSC4A6NHS7 340 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 TRAK2O60296 914 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 MBD3O95983 291 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 CYP2C8P10632 490 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 PTPREP23469 700 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 RPS6P62753 249 aaKnown RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 PTGDRQ13258 359 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 FCHSD1Q86WN1 690 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 C4orf32Q8N8J7 132 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 GTF3C2Q8WUA4 911 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 TMEM60Q9H2L4 133 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 ACAD9Q9H845 621 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 TXNRD2Q9NNW7 524 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 MAP3K20Q9NYL2 800 aaKnown RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 RABGAP1Q9Y3P9 1069 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 DDX49Q9Y6V7 483 aaKnown RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 RPTORQ8N122 1335 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 THSD7BQ9C0I4 1608 aa12.03□□□□□ -0.48
PABPC1-203ENST00000517921 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
PABPC1-203ENST00000517921 A0A1W2PQ27 194 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 A0A1W2PQ64 194 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 A0A1W2PQD8 194 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 SLC37A4O43826 429 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 NEMFO60524 1076 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 CUTAO60888 179 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 TDP2O95551 362 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 GRIN1Q05586 938 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 KLHL40Q2TBA0 621 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 SKOR2Q2VWA4 1001 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 TPRNQ4KMQ1 711 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 ADALQ6DHV7 355 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 PPP4R3AQ6IN85 833 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 RNF207Q6ZRF8 634 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 CHST13Q8NET6 341 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 MBOAT7Q96N66 472 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 PARK7Q99497 189 aaKnown RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 EHMT1Q9H9B1 1298 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 RBPJLQ9UBG7 517 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.49
PABPC1-203ENST00000517921 ADGRA2Q96PE1 1338 aa12.02□□□□□ -0.49
PABPC1-203ENST00000517921 CYP3A7-CYP3A51PA0A087WV96 503 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 GOLGA6L4A6NEF3 574 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 IGF2BP3O00425 579 aaKnown RBP eCLIP12.01□□□□□ -0.493e-8■■□□□ 11.7
PABPC1-203ENST00000517921 TRPA1O75762 1119 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 CYP3A4P08684 503 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 OR52Z1P0C646 297 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 LIG1P18858 919 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 CYP3A7P24462 503 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 CIITAP33076 1130 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 USP11P51784 963 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 ERVK-24P63145 666 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 BAATQ14032 418 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 SMCR8Q8TEV9 937 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 MRPS27Q92552 414 aaKnown RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 FERMT2Q96AC1 680 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 CLIC6Q96NY7 704 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 NAP1L4Q99733 375 aaKnown RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 MAF1Q9H063 256 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 GOLPH3LQ9H4A5 285 aa12.01□□□□□ -0.49
PABPC1-203ENST00000517921 ZCCHC17Q9NP64 241 aaKnown RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 A1CFQ9NQ94 594 aaKnown RBP12.01□□□□□ -0.49
PABPC1-203ENST00000517921 LAD1O00515 517 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 SLC25A27O95847 323 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 COPB2P35606 906 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 PRPHP41219 470 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 GCLCP48506 637 aaPredicted RBP12□□□□□ -0.49
PABPC1-203ENST00000517921 IL17AQ16552 155 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 Q3C1V9 767 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 ARL6IP4Q66PJ3 421 aaKnown RBP12□□□□□ -0.49
PABPC1-203ENST00000517921 SHC4Q6S5L8 630 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 CCAR1Q8IX12 1150 aaKnown RBP12□□□□□ -0.49
PABPC1-203ENST00000517921 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
PABPC1-203ENST00000517921 IL31RAQ8NI17 732 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 MTMR9Q96QG7 549 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms