RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 SV2BQ7L1I2 683 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-204ENST00000517824 ERMNQ8TAM6 284 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 SNX29Q8TEQ0 813 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 FEZ1Q99689 392 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 TMEM232C9JQI7 657 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 F5H6K3 240 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 PES1O00541 588 aaKnown RBP12.07□□□□□ -0.48
SPIDR-204ENST00000517824 SLC26A4O43511 780 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 TDP2O95551 362 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 FOSP01100 380 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-204ENST00000517824 VIL1P09327 827 aaKnown RBP12.07□□□□□ -0.48
SPIDR-204ENST00000517824 CDC25AP30304 524 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 EPHX2P34913 555 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 KCNJ6P48051 423 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 VEGFBP49765 207 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 STAT2P52630 851 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 KLRC3Q07444 240 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 TNFAIP1Q13829 316 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 TRIM14Q14142 442 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 USH1GQ495M9 461 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 EAPPQ56P03 285 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-204ENST00000517824 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 SH3BP5LQ7L8J4 393 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 PRMT6Q96LA8 375 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-204ENST00000517824 HACL1Q9UJ83 578 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 SCN4AP35499 1836 aa12.07□□□□□ -0.48
SPIDR-204ENST00000517824 GOLGA6L9A6NEM1 432 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 TMEM88BA6NKF7 163 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 DYNC1I1O14576 645 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 ZSCAN12O43309 604 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
SPIDR-204ENST00000517824 ZNF18P17022 549 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 ZNF76P36508 570 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 PDE4DQ08499 809 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 ARID5BQ14865 1188 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 FKBP1CQ5VVH2 108 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 CEP135Q66GS9 1140 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 PPP4R3AQ6IN85 833 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 CHURC1Q8WUH1 139 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 DPF2Q92785 391 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 NT5C3AQ9H0P0 336 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 SAMSN1Q9NSI8 373 aaKnown RBP12.06□□□□□ -0.48
SPIDR-204ENST00000517824 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-204ENST00000517824 ZBTB21Q9ULJ3 1066 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 PAXBP1Q9Y5B6 917 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.06□□□□□ -0.482e-6■■■■□ 24.8
SPIDR-204ENST00000517824 COL4A5P29400 1685 aa12.06□□□□□ -0.48
SPIDR-204ENST00000517824 KCNJ18B7U540 433 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 PPP1R3GB7ZBB8 358 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 N4BP3O15049 544 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 SLC37A4O43826 429 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 TUBB4AP04350 444 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 SSBP05455 408 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 KRT18P05783 430 aaKnown RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 CCT6AP40227 531 aaKnown RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 MMP14P50281 582 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 KCNJ12Q14500 433 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 PDIA5Q14554 519 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 CDKAL1Q5VV42 579 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 FAM83AQ86UY5 434 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 FAM160B2Q86V87 743 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 GPC2Q8N158 579 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 CCAR2Q8N163 923 aaKnown RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 IGSF22Q8N9C0 903 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 MYRIPQ8NFW9 859 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 LARP4BQ92615 738 aaKnown RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 DHTKD1Q96HY7 919 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 NUP88Q99567 741 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 TSG101Q99816 390 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 HSD3B7Q9H2F3 369 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 KBTBD4Q9NVX7 518 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
SPIDR-204ENST00000517824 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-204ENST00000517824 PARP14Q460N5 1801 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 A0A1B0GTH6 734 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 AKR1B15C9JRZ8 316 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 H7C1D1 291 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 RHOBTB3O94955 611 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 EEF1GP26641 437 aaKnown RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 CLK2P49760 499 aaKnown RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 USP11P51784 963 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms