RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 GPAMQ9HCL2 828 aa6.78□□□□□ -1.32
CD47-205ENST00000517766 DCP1AQ9NPI6 582 aaPredicted RBP6.78□□□□□ -1.32
CD47-205ENST00000517766 TIMMDC1Q9NPL8 285 aa6.78□□□□□ -1.32
CD47-205ENST00000517766 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
CD47-205ENST00000517766 DDX60LQ5H9U9 1706 aaKnown RBP6.78□□□□□ -1.32
CD47-205ENST00000517766 MROH7-TTC4A0A0A0MT08 1334 aa6.77□□□□□ -1.32
CD47-205ENST00000517766 GPR75-ASB3A0A0A6YYF3 556 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 KRBA1A5PL33 1030 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 A6NHS1 94 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 RANBP6O60518 1105 aaKnown RBP6.77□□□□□ -1.33
CD47-205ENST00000517766 MMP10P09238 476 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 IFNAR1P17181 557 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 SEC23AQ15436 765 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 SLC15A2Q16348 729 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 C1orf53Q5VUE5 145 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 STYK1Q6J9G0 422 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 ALKBH2Q6NS38 261 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 LRRC69Q6ZNQ3 347 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 CATIPQ7Z7H3 387 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 MICU3Q86XE3 530 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 GAS2L3Q86XJ1 694 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 LEO1Q8WVC0 666 aaPredicted RBP6.77□□□□□ -1.33
CD47-205ENST00000517766 SUSD3Q96L08 255 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
CD47-205ENST00000517766 TSPY26PQ9H489 355 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 ZNF287Q9HBT7 754 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 RBM28Q9NW13 759 aaKnown RBP6.77□□□□□ -1.33
CD47-205ENST00000517766 POLLQ9UGP5 575 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 RCOR1Q9UKL0 485 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
CD47-205ENST00000517766 TACC3Q9Y6A5 838 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 PSME4Q14997 1843 aa6.77□□□□□ -1.33
CD47-205ENST00000517766 TNKSO95271 1327 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 SYCE3A1L190 88 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 H0YIN7 160 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 DTNBO60941 627 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 DDAH1O94760 285 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 MICAL2O94851 1124 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 DEXIO95424 95 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 CELA2BP08218 269 aaPredicted RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 XBP1P17861 261 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 ATP4AP20648 1035 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 MSX1P28360 303 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 CDC27P30260 824 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 NASPP49321 788 aaPredicted RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 NTRK3Q16288 839 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 MFSD14BQ5SR56 506 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 IFIT1BQ5T764 474 aaKnown RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 C12orf60Q5U649 245 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 DPP8Q6V1X1 898 aaPredicted RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 FANCBQ8NB91 859 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 GAS2L1Q99501 681 aaPredicted RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 ZKSCAN3Q9BRR0 538 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 ALG1Q9BT22 464 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 RTFDC1Q9BY42 306 aaPredicted RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 RNF26Q9BY78 433 aaPredicted RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 DDX19AQ9NUU7 478 aaKnown RBP6.76□□□□□ -1.33
CD47-205ENST00000517766 MCM9Q9NXL9 1143 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 RTEL1Q9NZ71 1219 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 DNMT3LQ9UJW3 386 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 ROBO3Q96MS0 1386 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 SLX4Q8IY92 1834 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 GAKO14976 1311 aa6.76□□□□□ -1.33
CD47-205ENST00000517766 TSPY2A6NKD2 308 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 YEATS4O95619 227 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 ZNF16P17020 682 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 ERCC3P19447 782 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 BTDP43251 543 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 FKBP1AP62942 108 aaKnown RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 AKAP17AQ02040 695 aaKnown RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 GUCY1B3Q02153 619 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 KIF23Q02241 960 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 CCDC173Q0VFZ6 552 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 GNL2Q13823 731 aaKnown RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 SAFBQ15424 915 aaKnown RBP eCLIP6.75□□□□□ -1.33
CD47-205ENST00000517766 UVSSAQ2YD98 709 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 FAM173BQ6P4H8 233 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 PODNQ7Z5L7 613 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 DGKHQ86XP1 1220 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 RAB11FIP4Q86YS3 637 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 C2CD5Q86YS7 1000 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 RGL4Q8IZJ4 473 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 ZNF444Q8N0Y2 327 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 ENAHQ8N8S7 591 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 SUPT20HQ8NEM7 779 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 BICD2Q8TD16 824 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 KCNG4Q8TDN1 519 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 SH3RF3Q8TEJ3 882 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 NUP133Q8WUM0 1156 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 ZNF622Q969S3 477 aaKnown RBP eCLIP6.75□□□□□ -1.33
CD47-205ENST00000517766 GPR101Q96P66 508 aaPredicted RBP6.75□□□□□ -1.33
CD47-205ENST00000517766 CAMKK2Q96RR4 588 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 ZIC5Q96T25 663 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 MAP3K14Q99558 947 aa6.75□□□□□ -1.33
CD47-205ENST00000517766 SLC26A6Q9BXS9 759 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms