RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 MYL10Q9BUA6 226 aa28.54■■■□□ 2.16
PVT1-204ENST00000517525 DYNC1LI2O43237 492 aaPredicted RBP28.53■■■□□ 2.16
PVT1-204ENST00000517525 CDK7P50613 346 aa28.53■■■□□ 2.16
PVT1-204ENST00000517525 TLE2Q04725 743 aa28.53■■■□□ 2.16
PVT1-204ENST00000517525 FSCN1Q16658 493 aaKnown RBP28.53■■■□□ 2.16
PVT1-204ENST00000517525 FANCBQ8NB91 859 aa28.53■■■□□ 2.16
PVT1-204ENST00000517525 SEZ6LQ9BYH1 1024 aa28.53■■■□□ 2.16
PVT1-204ENST00000517525 MYH6P13533 1939 aa28.52■■■□□ 2.16
PVT1-204ENST00000517525 ZEB2O60315 1214 aa28.52■■■□□ 2.16
PVT1-204ENST00000517525 CFBP00751 764 aa28.52■■■□□ 2.16
PVT1-204ENST00000517525 SRBD1Q8N5C6 995 aaKnown RBP28.52■■■□□ 2.16
PVT1-204ENST00000517525 RRP36Q96EU6 259 aaKnown RBP28.52■■■□□ 2.16
PVT1-204ENST00000517525 LRRC2Q9BYS8 371 aa28.52■■■□□ 2.16
PVT1-204ENST00000517525 BAZ2BQ9UIF8 2168 aaKnown RBP28.51■■■□□ 2.16
PVT1-204ENST00000517525 RCAN1P53805 252 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 STXBP2Q15833 593 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 TMEM63BQ5T3F8 832 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 FBXL16Q8N461 479 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 PDLIM7Q9NR12 457 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 PXMP2Q9NR77 195 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 PRKAG2Q9UGJ0 569 aa28.51■■■□□ 2.15
PVT1-204ENST00000517525 FXR1P51114 621 aaKnown RBP eCLIP28.5■■■□□ 2.15
PVT1-204ENST00000517525 BEX3Q00994 111 aa28.5■■■□□ 2.15
PVT1-204ENST00000517525 CCDC62Q6P9F0 684 aa28.5■■■□□ 2.15
PVT1-204ENST00000517525 APOA5Q6Q788 366 aa28.5■■■□□ 2.15
PVT1-204ENST00000517525 SYNE3Q6ZMZ3 975 aa28.5■■■□□ 2.15
PVT1-204ENST00000517525 SLC43A3Q8NBI5 491 aa28.5■■■□□ 2.15
PVT1-204ENST00000517525 MROH7Q68CQ1 1323 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 A0A0U1RQG5 324 aaPredicted RBP28.49■■■□□ 2.15
PVT1-204ENST00000517525 GCOM1H8Y6P7 765 aaPredicted RBP28.49■■■□□ 2.15
PVT1-204ENST00000517525 EIF3JO75822 258 aaKnown RBP28.49■■■□□ 2.15
PVT1-204ENST00000517525 PLEKHA8P1O95397 391 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 NR3C2P08235 984 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 POLR2MP0CAP2 368 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 TTLL4Q14679 1199 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 PPP2R5BQ15173 497 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 ARHGEF16Q5VV41 709 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 TMTC3Q6ZXV5 915 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 SNX14Q9Y5W7 946 aa28.49■■■□□ 2.15
PVT1-204ENST00000517525 RANBP2P49792 3224 aaKnown RBP28.48■■■□□ 2.15
PVT1-204ENST00000517525 ARVCFO00192 962 aa28.48■■■□□ 2.15
PVT1-204ENST00000517525 KIAA0355O15063 1070 aa28.48■■■□□ 2.15
PVT1-204ENST00000517525 PDCD2LQ9BRP1 358 aa28.48■■■□□ 2.15
PVT1-204ENST00000517525 RBM28Q9NW13 759 aaKnown RBP28.48■■■□□ 2.15
PVT1-204ENST00000517525 CLTBP09497 229 aa28.47■■■□□ 2.15
PVT1-204ENST00000517525 LBHD1Q9BQE6 289 aaPredicted RBP28.47■■■□□ 2.15
PVT1-204ENST00000517525 SEC63Q9UGP8 760 aaKnown RBP28.47■■■□□ 2.15
PVT1-204ENST00000517525 TRIM43BA6NCK2 446 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 A6NJR5 290 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 DCDC2CA8MYV0 355 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 TXNP10599 105 aaKnown RBP28.46■■■□□ 2.15
PVT1-204ENST00000517525 RXRAP19793 462 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 PTGS1P23219 599 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 CPT1AP50416 773 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 CXCL17Q6UXB2 119 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 VSIG10LQ86VR7 867 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 TRIM43Q96BQ3 446 aaPredicted RBP28.46■■■□□ 2.15
PVT1-204ENST00000517525 POLR3EQ9NVU0 708 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 BRPF3Q9ULD4 1205 aa28.46■■■□□ 2.15
PVT1-204ENST00000517525 FRMPD4Q14CM0 1322 aa28.45■■■□□ 2.15
PVT1-204ENST00000517525 PIK3CDO00329 1044 aa28.45■■■□□ 2.14
PVT1-204ENST00000517525 KPNA6O60684 536 aa28.45■■■□□ 2.14
PVT1-204ENST00000517525 EIF2AK2P19525 551 aaKnown RBP28.45■■■□□ 2.14
PVT1-204ENST00000517525 HOXA13P31271 388 aaPredicted RBP28.45■■■□□ 2.14
PVT1-204ENST00000517525 FAAP100Q0VG06 881 aa28.45■■■□□ 2.14
PVT1-204ENST00000517525 MICU3Q86XE3 530 aa28.45■■■□□ 2.14
PVT1-204ENST00000517525 OR6J1Q8NGC5 347 aa28.45■■■□□ 2.14
PVT1-204ENST00000517525 AGXT2Q9BYV1 514 aa28.45■■■□□ 2.14
PVT1-204ENST00000517525 UBE2OQ9C0C9 1292 aaKnown RBP28.45■■■□□ 2.14
PVT1-204ENST00000517525 ZBTB43O43298 467 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 PQBP1O60828 265 aaKnown RBP28.44■■■□□ 2.14
PVT1-204ENST00000517525 ARIH2O95376 493 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 BRDTQ58F21 947 aaPredicted RBP28.44■■■□□ 2.14
PVT1-204ENST00000517525 SH3RF1Q7Z6J0 888 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 TEX2Q8IWB9 1127 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 VTI1AQ96AJ9 217 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 TCEANC2Q96MN5 208 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 DNAH12Q6ZR08 3092 aa28.44■■■□□ 2.14
PVT1-204ENST00000517525 PSMA5P28066 241 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 MDM2Q00987 491 aaPredicted RBP28.43■■■□□ 2.14
PVT1-204ENST00000517525 FUT2Q10981 343 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 PGM5Q15124 567 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 BLOC1S2Q6QNY1 142 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 TDHQ8IZJ6 230 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 EMID1Q96A84 441 aaPredicted RBP28.43■■■□□ 2.14
PVT1-204ENST00000517525 JAKMIP1Q96N16 626 aaKnown RBP28.43■■■□□ 2.14
PVT1-204ENST00000517525 USP26Q9BXU7 913 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 TBX21Q9UL17 535 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 GRIN2DO15399 1336 aa28.43■■■□□ 2.14
PVT1-204ENST00000517525 PURAQ00577 322 aaKnown RBP28.42■■■□□ 2.14
PVT1-204ENST00000517525 KCNV1Q6PIU1 500 aa28.42■■■□□ 2.14
PVT1-204ENST00000517525 SEPT14Q6ZU15 432 aa28.42■■■□□ 2.14
PVT1-204ENST00000517525 FAM126BQ8IXS8 530 aa28.42■■■□□ 2.14
PVT1-204ENST00000517525 CMTR1Q8N1G2 835 aaKnown RBP28.42■■■□□ 2.14
PVT1-204ENST00000517525 PIBF1Q8WXW3 757 aa28.42■■■□□ 2.14
PVT1-204ENST00000517525 PRDM5Q9NQX1 630 aaPredicted RBP28.42■■■□□ 2.14
PVT1-204ENST00000517525 DDX41Q9UJV9 622 aaKnown RBP28.42■■■□□ 2.14
PVT1-204ENST00000517525 RGS20O76081 388 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 GH1P01241 217 aa28.41■■■□□ 2.14
PVT1-204ENST00000517525 CD4P01730 458 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms