RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 SAMM50Q9Y512 469 aa1.27□□□□□ -2.21
RNU6-557P-201ENST00000516842 LRP12Q9Y561 859 aa1.27□□□□□ -2.21
RNU6-557P-201ENST00000516842 COX11Q9Y6N1 276 aa1.27□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF205O95201 554 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 XRCC5P13010 732 aaKnown RBP1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 VAV1P15498 845 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 NPR3P17342 541 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 HIBADHP31937 336 aaKnown RBP1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 STAT5AP42229 794 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF81P51508 661 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 PCOLCEQ15113 449 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 FBXO42Q6P3S6 717 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 CRTC3Q6UUV7 619 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 FIBCD1Q8N539 461 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 CLP1Q92989 425 aaKnown RBP1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 SEC61A2Q9H9S3 476 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF580Q9UK33 172 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 PACSIN3Q9UKS6 424 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 PCDHB5Q9Y5E4 795 aa1.26□□□□□ -2.21
RNU6-557P-201ENST00000516842 CHURC1-FNTBB4DL54 471 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 H0Y858 1186 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 RAD17O75943 681 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 GSTM1P09488 218 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 FOXF2Q12947 444 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 NBPF9Q3BBW0 867 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZC3H7AQ8IWR0 971 aaKnown RBP1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 KLHL36Q8N4N3 616 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 NAT16Q8N8M0 369 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 NUDT10Q8NFP7 164 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 NUDT11Q96G61 164 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 CALR3Q96L12 384 aaKnown RBP1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 KIF2CQ99661 725 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF703Q9H7S9 590 aaPredicted RBP1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 NRDE2Q9H7Z3 1164 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 TLR9Q9NR96 1032 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 PPP4R2Q9NY27 417 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 CROTQ9UKG9 612 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 PTPN22Q9Y2R2 807 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 RWDD3Q9Y3V2 267 aa1.25□□□□□ -2.21
RNU6-557P-201ENST00000516842 SIGLEC6O43699 453 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 PPP1R11O60927 126 aaPredicted RBP1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 RHOBTB3O94955 611 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 FAM13AO94988 1023 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 DNAJA1P31689 397 aaKnown RBP1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 BMP8BP34820 402 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 SLC9A5Q14940 896 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 LCE3AQ5TA76 89 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 HLA-DQA1Q5Y7H0 255 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 ETV3LQ6ZN32 361 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 LRP10Q7Z4F1 713 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 C1QL2Q7Z5L3 287 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 MRGPREQ86SM8 312 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 NEIL1Q96FI4 390 aaPredicted RBP1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 FAM89AQ96GI7 184 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 PEX11GQ96HA9 241 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 OR14A2Q96R54 314 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 NIF3L1Q9GZT8 377 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 CHST7Q9NS84 486 aa1.24□□□□□ -2.21
RNU6-557P-201ENST00000516842 PRR23D1E9PI22 279 aaPredicted RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF185O15231 689 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 DNAJA2O60884 412 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZFPL1O95159 310 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 NEFLP07196 543 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 PRR23D2P0DMB1 279 aaPredicted RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 PLCG1P19174 1290 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 YARSP54577 528 aaKnown RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 PDE4BQ07343 736 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 TRIM26Q12899 539 aaPredicted RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 ELOAQ14241 798 aaKnown RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 NOLC1Q14978 699 aaKnown RBP eCLIP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 PHF19Q5T6S3 580 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 TRMT10BQ6PF06 316 aaKnown RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 DLK2Q6UY11 383 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 ERICH6Q7L0X2 663 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 POLNQ7Z5Q5 900 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 RALYLQ86SE5 291 aaKnown RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF512BQ96KM6 892 aaPredicted RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 DPYSL5Q9BPU6 564 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 MLST8Q9BVC4 326 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 CEP44Q9C0F1 390 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 BARX1Q9HBU1 254 aaPredicted RBP1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 GFOD1Q9NXC2 390 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 FTSJ1Q9UET6 329 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 KLHL3Q9UH77 587 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 ADAM30Q9UKF2 790 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 SLC4A7Q9Y6M7 1214 aa1.23□□□□□ -2.21
RNU6-557P-201ENST00000516842 GRID2IPA4D2P6 1211 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 GPR182O15218 404 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 FOXL1Q12952 345 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 ZNF211Q13398 564 aaPredicted RBP1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 FHL3Q13643 280 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 CR1LQ2VPA4 569 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 TMPRSS6Q8IU80 811 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 SRRM1Q8IYB3 904 aaKnown RBP1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 SLFN12Q8IYM2 578 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 BEND2Q8NDZ0 799 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 ANKS1AQ92625 1134 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 CCDC74BQ96LY2 380 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 SLC12A9Q9BXP2 914 aa1.22□□□□□ -2.21
RNU6-557P-201ENST00000516842 PARPBPQ9NWS1 579 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms