RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 AP5M1Q9H0R1 490 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ADAM7Q9H2U9 754 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CLEC1BQ9P126 229 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 APEX2Q9UBZ4 518 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CNOT11Q9UKZ1 510 aaKnown RBP4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PLA2G2DQ9UNK4 145 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PLS3P13797 630 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 GJA9P57773 515 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ZFYVE27Q5T4F4 411 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NT5DC1Q5TFE4 455 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 C9orf131Q5VYM1 1079 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 IQCEQ6IPM2 695 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 FAM169BQ8N8A8 192 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SMARCC2Q8TAQ2 1214 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ANAPC16Q96DE5 110 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SPATA25Q9BR10 227 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 BDH2Q9BUT1 245 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NTMQ9P121 344 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 FBLN5Q9UBX5 448 aa4.32□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SMARCA5O60264 1052 aaPredicted RBP4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PPP1R11O60927 126 aaPredicted RBP4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 FUCA1P04066 466 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CYP2C8P10632 490 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PLP2Q04941 152 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SPATS1Q496A3 300 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 TNNI3KQ59H18 835 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 UBXN11Q5T124 520 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 E4F1Q66K89 784 aaPredicted RBP4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 GTF2IRD2BQ6EKJ0 949 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 TTLL7Q6ZT98 887 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 GTF2IRD2Q86UP8 949 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 TRIM59Q8IWR1 403 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 HOMEZQ8IX15 550 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CARFQ8N187 725 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ZNF526Q8TF50 670 aaPredicted RBP4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PPP1R14AQ96A00 147 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ACBD3Q9H3P7 528 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CAPN10Q9HC96 672 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CYP26B1Q9NR63 512 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MARCH2Q9P0N8 246 aa4.31□□□□□ -1.72
SCARNA16.2-201ENST00000516520 A0A1B0GTL3 188 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NTRK1P04629 796 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 THBDP07204 575 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ADRB1P08588 477 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SLC6A11P48066 632 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SARSP49591 514 aaKnown RBP4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 GTF2A2P52657 109 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 DLX2Q07687 328 aaPredicted RBP4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 RTP5Q14D33 572 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ETV3LQ6ZN32 361 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ZC3H18Q86VM9 953 aaKnown RBP4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 VPS37DQ86XT2 251 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ADGRG2Q8IZP9 1017 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PLEKHO2Q8TD55 490 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SEC14L1Q92503 715 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MRGPRX3Q96LB0 322 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NKX2-4Q9H2Z4 354 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 BCAS3Q9H6U6 928 aa4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 KIAA1522Q9P206 1035 aaPredicted RBP4.3□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MYO1BO43795 1136 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SSBP05455 408 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ATF4P18848 351 aaPredicted RBP4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 RPL11P62913 178 aaKnown RBP4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 EFEMP1Q12805 493 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 KCNAB2Q13303 367 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MROH9Q5TGP6 573 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MIB1Q86YT6 1006 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 RIOX2Q8IUF8 465 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 LINC00482Q8N8I6 264 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NPLOC4Q8TAT6 608 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ZBTB8AQ96BR9 441 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NGRNQ9NPE2 291 aaKnown RBP4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 GPRC5CQ9NQ84 441 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ACTR10Q9NZ32 417 aa4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 TIMM13Q9Y5L4 95 aaPredicted RBP4.29□□□□□ -1.72
SCARNA16.2-201ENST00000516520 C22orf46C9J442 243 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 K7ESM1 405 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SMAD7O15105 426 aaKnown RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MEFVO15553 781 aaPredicted RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PRICKLE3O43900 615 aaPredicted RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NOBOXO60393 691 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CPP00450 1065 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 C8BP07358 591 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 HOXC12P31275 282 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 GNL2Q13823 731 aaKnown RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MBLAC2Q68D91 279 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 C6orf15Q6UXA7 325 aaPredicted RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 TEX2Q8IWB9 1127 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 Q8N1Y9 231 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 KYQ8NBH2 561 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 DPF3Q92784 378 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 DIO2Q92813 273 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 DDX11Q96FC9 970 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CCDC140Q96MF4 163 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 NOX5Q96PH1 765 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 LNPKQ9C0E8 428 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SPATA6Q9NWH7 488 aaPredicted RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 BTG4Q9NY30 223 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 LRP2BPQ9P2M1 347 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms