RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 SHOXO15266 292 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 LDHBP07195 334 aaKnown RBP3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 IL12RB1P42701 662 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 RBM10P98175 930 aaKnown RBP3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 WWC2Q6AWC2 1192 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 KBTBD2Q8IY47 623 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 C7orf61Q8IZ16 206 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ATG4CQ96DT6 458 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PTPN18Q99952 460 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 MTA3Q9BTC8 594 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 JADE2Q9NQC1 790 aa3.4□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ANKRD33BA6NCL7 494 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CYP1A1P04798 512 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 TAF1CQ15572 869 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 LSM12Q3MHD2 195 aaKnown RBP3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 NRN1LQ496H8 165 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 NLRC3Q7RTR2 1065 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FBXO33Q7Z6M2 555 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ZC3H18Q86VM9 953 aaKnown RBP3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 HOMEZQ8IX15 550 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 EDAQ92838 391 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 SLC6A18Q96N87 628 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FCRL3Q96P31 734 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 AGAP2Q99490 1192 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 LRRC3Q9BY71 257 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 RNF19AQ9NV58 838 aa3.39□□□□□ -1.87
RNU6-1278P-201ENST00000516130 TNFRSF10CO14798 259 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PRPF40AO75400 957 aaKnown RBP3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FAM196AQ6ZSG2 479 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 KLHL36Q8N4N3 616 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FAM26EQ8N5C1 309 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FBXO27Q8NI29 283 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 TMEM74Q96NL1 305 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 TMEM168Q9H0V1 697 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 GZF1Q9H116 711 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CSRNP2Q9H175 543 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 EHMT1Q9H9B1 1298 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PCDHB14Q9Y5E9 798 aa3.38□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PPP1R11O60927 126 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 GARTP22102 1010 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 RGS19P49795 217 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ADAM9Q13443 819 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CCDC142Q17RM4 750 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CWF19L2Q2TBE0 894 aaKnown RBP3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 USP39Q53GS9 565 aaKnown RBP3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ANKRD39Q53RE8 183 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PRAMEF18Q5VWM3 479 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 RCSD1Q6JBY9 416 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CD300LDQ6UXZ3 194 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 MRGPRGQ86SM5 289 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 NEU4Q8WWR8 484 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ADOQ96SZ5 270 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 RSRP1Q9BUV0 290 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 L2HGDHQ9H9P8 463 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 SEC61A2Q9H9S3 476 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 NGRNQ9NPE2 291 aaKnown RBP3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 RWDD3Q9Y3V2 267 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 USP31Q70CQ4 1352 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ROBO2Q9HCK4 1378 aa3.37□□□□□ -1.87
RNU6-1278P-201ENST00000516130 U2SURPO15042 1029 aaKnown RBP3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FOXS1O43638 330 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 B4GALT4O60513 344 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 IFNGR1P15260 489 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 NME1P15531 152 aaKnown RBP3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 IL13P35225 146 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ZNF445P59923 1031 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 TAGLNQ01995 201 aaKnown RBP3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CCDC27Q2M243 656 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 SNAP47Q5SQN1 464 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 EEF1DP3Q658K8 133 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 TCTN3Q6NUS6 607 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 STK32CQ86UX6 486 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 DCP2Q8IU60 420 aaKnown RBP3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 GOLM1Q8NBJ4 401 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 EXTL1Q92935 676 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 SUCOQ9UBS9 1254 aaKnown RBP3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 DMRT1Q9Y5R6 373 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FHOD1Q9Y613 1164 aa3.36□□□□□ -1.87
RNU6-1278P-201ENST00000516130 MEIS3P2A8K0S8 358 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 F6X3S4 739 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PLSCR1O15162 318 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CNOT4O95628 575 aaKnown RBP3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 DGCR2P98153 550 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 PWP1Q13610 501 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 BHLHA9Q7RTU4 235 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 GLCCI1Q86VQ1 547 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 FAM126BQ8IXS8 530 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CACTINQ8WUQ7 758 aaKnown RBP3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 DHRS1Q96LJ7 313 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 BRMS1Q9HCU9 246 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 KCNQ5Q9NR82 932 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 SIT1Q9Y3P8 196 aa3.35□□□□□ -1.87
RNU6-1278P-201ENST00000516130 C9IYK1 514 aa3.34□□□□□ -1.87
RNU6-1278P-201ENST00000516130 CYP7B1O75881 506 aa3.34□□□□□ -1.87
RNU6-1278P-201ENST00000516130 NTRK1P04629 796 aa3.34□□□□□ -1.87
RNU6-1278P-201ENST00000516130 ITGB6P18564 788 aa3.34□□□□□ -1.87
RNU6-1278P-201ENST00000516130 GBP2P32456 591 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1278P-201ENST00000516130 MLLT6P55198 1093 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms