RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 ATXN7L2Q5T6C5 722 aaPredicted RBP0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 GFI1BQ5VTD9 330 aa0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 RALYLQ86SE5 291 aaKnown RBP0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ZC3H15Q8WU90 426 aaKnown RBP0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 HAS1Q92839 578 aa0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 NEIL1Q96FI4 390 aaPredicted RBP0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 OR14A2Q96R54 314 aa0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 WNT10AQ9GZT5 417 aa0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 BARX1Q9HBU1 254 aaPredicted RBP0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PCDH18Q9HCL0 1135 aa0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 GIT1Q9Y2X7 761 aa0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 KLF2Q9Y5W3 355 aaPredicted RBP0.49□□□□□ -2.33
SCARNA21.1-201ENST00000515996 RP1L1Q8IWN7 2480 aaPredicted RBP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 KRTAP23-1A1A580 65 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 TYRP1P17643 537 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ARNTP27540 789 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 POLGP54098 1239 aaPredicted RBP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 NHLH1Q02575 133 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 DPYDQ12882 1025 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PTPAQ15257 358 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 WASHC4Q2M389 1173 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 AWAT2Q6E213 333 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 RHOUQ7L0Q8 258 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ZNF276Q8N554 614 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 FAM26EQ8N5C1 309 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 SH2D3CQ8N5H7 860 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ABTB2Q8N961 1025 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 LINC00116Q8NCU8 138 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 TTC16Q8NEE8 873 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 SYTL5Q8TDW5 730 aaPredicted RBP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ZCCHC14Q8WYQ9 949 aaKnown RBP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 EDEM1Q92611 657 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 TCTN2Q96GX1 697 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 HDAC8Q9BY41 377 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 FAM117AQ9C073 453 aa0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 GPN3Q9UHW5 284 aaPredicted RBP0.48□□□□□ -2.33
SCARNA21.1-201ENST00000515996 KMT2BQ9UMN6 2715 aaPredicted RBP0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PRSS44E7EML9 344 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ATP9BO43861 1147 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 MATN4O95460 622 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 MAPK8P45983 427 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 TAF6P49848 677 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 MLLT6P55198 1093 aaPredicted RBP0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 DNM1Q05193 864 aaKnown RBP0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PPP2R3AQ06190 1150 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 NMIQ13287 307 aaPredicted RBP0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 CRHR2Q13324 411 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 SLC44A4Q53GD3 710 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 NBPF6Q5VWK0 638 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 BMP8AQ7Z5Y6 402 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PROKR1Q8TCW9 393 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 FRS2Q8WU20 508 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 RNF141Q8WVD5 230 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 DDRGK1Q96HY6 314 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 NBPF4Q96M43 638 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 CBX8Q9HC52 389 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ABCB6Q9NP58 842 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 KMT5AQ9NQR1 393 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PDLIM7Q9NR12 457 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 TMEM39AQ9NV64 488 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 STIM2Q9P246 746 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 FTSJ1Q9UET6 329 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 PCDHA4Q9UN74 947 aa0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 CCDC9Q9Y3X0 531 aaKnown RBP0.47□□□□□ -2.33
SCARNA21.1-201ENST00000515996 ZNF521Q96K83 1311 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 NOTCH1P46531 2555 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 CGAP01215 116 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 PDGFAP04085 211 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 GLI4P10075 376 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 PCSK2P16519 638 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 TRIM26Q12899 539 aaPredicted RBP0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 ADAM9Q13443 819 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 INPP5AQ14642 412 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 RRP1BQ14684 758 aaKnown RBP0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 SLC9A5Q14940 896 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 C11orf87Q6NUJ2 197 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 DAGLBQ8NCG7 672 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 GRIN3AQ8TCU5 1115 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 LENG9Q96B70 501 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 PCMTD1Q96MG8 357 aaPredicted RBP0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 ZSWIM3Q96MP5 696 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 DPYSL5Q9BPU6 564 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 CDADC1Q9BWV3 514 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 ANTXR1Q9H6X2 564 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 METTL14Q9HCE5 456 aaKnown RBP0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 OAZ3Q9UMX2 235 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 ICKQ9UPZ9 632 aa0.46□□□□□ -2.34
SCARNA21.1-201ENST00000515996 TTC28Q96AY4 2481 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 COL11A2P13942 1736 aaPredicted RBP0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 RTL8CO15255 209 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 SMAD6O43541 496 aaKnown RBP0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 ZNF205O95201 554 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 ABHD16AO95870 558 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 CELA3AP09093 270 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 GRK4P32298 578 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 MSX2P35548 267 aaPredicted RBP0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 NOVP48745 357 aa0.45□□□□□ -2.34
SCARNA21.1-201ENST00000515996 RAC3P60763 192 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms