RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 CLIC6Q96NY7 704 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 NT5C3AQ9H0P0 336 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 GOLPH3LQ9H4A5 285 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 ELP3Q9H9T3 547 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 RRAGCQ9HB90 399 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 GBA2Q9HCG7 927 aaPredicted RBP10.71□□□□□ -0.69
TPM3-222ENST00000515609 RMND1Q9NWS8 449 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 TMEM260Q9NX78 707 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 TCEAL9Q9UHQ7 104 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 AGTPBP1Q9UPW5 1226 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 SLC45A1Q9Y2W3 748 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 KDM3AQ9Y4C1 1321 aa10.71□□□□□ -0.69
TPM3-222ENST00000515609 PFASO15067 1338 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 POTECB2RU33 542 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 MAFGO15525 162 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 SLC25A27O95847 323 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 ZBTB48P10074 688 aaPredicted RBP10.7□□□□□ -0.7
TPM3-222ENST00000515609 STAT3P40763 770 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 STAT6P42226 847 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 TYRO3Q06418 890 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 RRAGBQ5VZM2 374 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 RNF207Q6ZRF8 634 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 FCHSD1Q86WN1 690 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 IGSF22Q8N9C0 903 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 OPTNQ96CV9 577 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 MTMR9Q96QG7 549 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 ACAD9Q9H845 621 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
TPM3-222ENST00000515609 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
TPM3-222ENST00000515609 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 LRWD1Q9UFC0 647 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 PAPPA2Q9BXP8 1791 aa10.7□□□□□ -0.7
TPM3-222ENST00000515609 ZNF536O15090 1300 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 POLR2AP24928 1970 aaKnown RBP10.69□□□□□ -0.7
TPM3-222ENST00000515609 IRF6O14896 467 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 PPP1R2P41236 205 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 TXKP42681 527 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 SNAP25P60880 206 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 CCNA1P78396 465 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 POSTNQ15063 836 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 SNRNP48Q6IEG0 339 aaKnown RBP10.69□□□□□ -0.7
TPM3-222ENST00000515609 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 SMARCE1Q969G3 411 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 ATG4CQ96DT6 458 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 CDHR1Q96JP9 859 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 GSDMAQ96QA5 445 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 WDR11Q9BZH6 1224 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 TTC12Q9H892 705 aaPredicted RBP10.69□□□□□ -0.7
TPM3-222ENST00000515609 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
TPM3-222ENST00000515609 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
TPM3-222ENST00000515609 ADD3Q9UEY8 706 aaKnown RBP10.69□□□□□ -0.7
TPM3-222ENST00000515609 BECN2A8MW95 431 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 GOLGA6L19H0YKK7 550 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 BCRP11274 1271 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 MUTP22033 750 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 HOXA13P31271 388 aaPredicted RBP10.68□□□□□ -0.7
TPM3-222ENST00000515609 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 CEP55Q53EZ4 464 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 PRR16Q569H4 304 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 NOM1Q5C9Z4 860 aaKnown RBP10.68□□□□□ -0.7
TPM3-222ENST00000515609 PCNX4Q63HM2 1172 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 MAP1SQ66K74 1059 aaPredicted RBP10.68□□□□□ -0.7
TPM3-222ENST00000515609 CABP7Q86V35 215 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 POTEDQ86YR6 584 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 MLKLQ8NB16 471 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 NSUN6Q8TEA1 469 aaKnown RBP10.68□□□□□ -0.7
TPM3-222ENST00000515609 CRYGNQ8WXF5 182 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 DHX58Q96C10 678 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 EPSTI1Q96J88 318 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 RIT2Q99578 217 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 ZNF408Q9H9D4 720 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 KCNMB3Q9NPA1 279 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
TPM3-222ENST00000515609 LOC102724159A0A0B4J2E5 919 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
TPM3-222ENST00000515609 SMTNL1A8MU46 457 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 OPLAHO14841 1288 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 TDP2O95551 362 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 CCND2P30279 289 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
TPM3-222ENST00000515609 TECP42680 631 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 GCLCP48506 637 aaPredicted RBP10.67□□□□□ -0.7
TPM3-222ENST00000515609 ZNF165P49910 485 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 INHBEP58166 350 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 PLS1Q14651 629 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 PWP2Q15269 919 aaKnown RBP10.67□□□□□ -0.7
TPM3-222ENST00000515609 GNPTABQ3T906 1256 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 ARHGEF16Q5VV41 709 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 NLRX1Q86UT6 975 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 PLA2G4DQ86XP0 818 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 RIOX2Q8IUF8 465 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 PDILTQ8N807 584 aa10.67□□□□□ -0.7
TPM3-222ENST00000515609 DNERQ8NFT8 737 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms