RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 BEX3Q00994 111 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 ADCK5Q3MIX3 580 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 SCFD2Q8WU76 684 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 TOX2Q96NM4 488 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 RMDN3Q96TC7 470 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 LRRC2Q9BYS8 371 aa17.19■□□□□ 0.34
HMGCLL1-209ENST00000515546 A0A0U1RQG5 324 aaPredicted RBP17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 NKRFO15226 690 aaKnown RBP eCLIP17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 DYNC1LI2O43237 492 aaPredicted RBP17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 CABYRO75952 493 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 CFBP00751 764 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 HSPA4P34932 840 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 GNAQP50148 359 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 CDK7P50613 346 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 DHX32Q7L7V1 743 aaKnown RBP17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 PXMP2Q9NR77 195 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 PRKAG2Q9UGJ0 569 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 SLC12A7Q9Y666 1083 aa17.18■□□□□ 0.34
HMGCLL1-209ENST00000515546 TRIM43BA6NCK2 446 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 PQBP1O60828 265 aaKnown RBP17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 CLTBP09497 229 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 RXRAP19793 462 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 PPP2R5BQ15173 497 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 CCDC62Q6P9F0 684 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 APOA5Q6Q788 366 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 CXCL17Q6UXB2 119 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 SH3RF1Q7Z6J0 888 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 SLC43A3Q8NBI5 491 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 RRP36Q96EU6 259 aaKnown RBP17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 UBE2OQ9C0C9 1292 aaKnown RBP17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 PRDM5Q9NQX1 630 aaPredicted RBP17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 MROH7Q68CQ1 1323 aa17.17■□□□□ 0.34
HMGCLL1-209ENST00000515546 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 ARVCFO00192 962 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 REC8O95072 547 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 ARIH2O95376 493 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 EIF2AK2P19525 551 aaKnown RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 MDM2Q00987 491 aaPredicted RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 FAAP100Q0VG06 881 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 TTLL4Q14679 1199 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 STXBP2Q15833 593 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 ARHGEF16Q5VV41 709 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 TDHQ8IZJ6 230 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 LBHD1Q9BQE6 289 aaPredicted RBP17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 PDCD2LQ9BRP1 358 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 TBX21Q9UL17 535 aa17.16■□□□□ 0.34
HMGCLL1-209ENST00000515546 GCOM1H8Y6P7 765 aaPredicted RBP17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 ZEB2O60315 1214 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 EIF3JO75822 258 aaKnown RBP17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 NR3C2P08235 984 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 POLR2MP0CAP2 368 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 CPT1AP50416 773 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 RCAN1P53805 252 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 MICU3Q86XE3 530 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 RAB11FIP4Q86YS3 637 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 FAM126BQ8IXS8 530 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 FANCBQ8NB91 859 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 SEZ6LQ9BYH1 1024 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 BRPF3Q9ULD4 1205 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 SNX14Q9Y5W7 946 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 GRIN2DO15399 1336 aa17.15■□□□□ 0.34
HMGCLL1-209ENST00000515546 A6NJR5 290 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 DCDC2CA8MYV0 355 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 TXNP10599 105 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 ITGB8P26012 769 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 PURAQ00577 322 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 CMTR1Q8N1G2 835 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 IL31RAQ8NI17 732 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 PIBF1Q8WXW3 757 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 POLR3EQ9NVU0 708 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 SEC63Q9UGP8 760 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 NID2Q14112 1375 aa17.14■□□□□ 0.33
HMGCLL1-209ENST00000515546 KIAA1217Q5T5P2 1943 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 PIK3CDO00329 1044 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 SOX1O00570 391 aaPredicted RBP17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 RGS20O76081 388 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 CD4P01730 458 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 ARHGAP1Q07960 439 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 FUT2Q10981 343 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 PGM5Q15124 567 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 VSIG10LQ86VR7 867 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 FBXL16Q8N461 479 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 COPS5Q92905 334 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 BADQ92934 168 aa17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
HMGCLL1-209ENST00000515546 CNTNAP5Q8WYK1 1306 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms