RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, human

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-222	ENST00000515159	SF3A1	Q15459	793 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	DIXDC1	Q155Q3	683 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CTC1	Q2NKJ3	1217 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TRIM71	Q2Q1W2	868 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CCDC57	Q2TAC2	916 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	LARP1B	Q659C4	914 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NCAPH2	Q6IBW4	605 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CPSF7	Q8N684	471 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	KIFAP3	Q92845	792 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CGREF1	Q99674	301 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	FAM129A	Q9BZQ8	928 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TFIP11	Q9UBB9	837 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	EFR3B	Q9Y2G0	817 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	RBM8A	Q9Y5S9	174 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	IGSF1	Q8N6C5	1336 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	SI	P14410	1827 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	BTBD18	B2RXH4	712 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TPBGL	P0DKB5	382 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	U2AF1L5	P0DN76	240 aa	Predicted RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	GNAT1	P11488	350 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CD44	P16070	742 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	PTPN2	P17706	415 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	SMARCA1	P28370	1054 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	GNG11	P61952	73 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	U2AF1	Q01081	240 aa	Known RBP eCLIP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	OCRL	Q01968	901 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	FAM91A1	Q658Y4	838 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	LRP10	Q7Z4F1	713 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	LCA5	Q86VQ0	697 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NECAB1	Q8N987	351 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NKX1-2	Q9UD57	310 aa	Predicted RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	DMGDH	Q9UI17	866 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	MAN1B1	Q9UKM7	699 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	STXBP5L	Q9Y2K9	1186 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CYP46A1	Q9Y6A2	500 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	DOCK1	Q14185	1865 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159		A0A1W2PQC6	194 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159		A0A1W2PQJ5	194 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CCT8L1P	A6NM43	557 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	STXBP3	O00186	592 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	EYA4	O95677	639 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	BCR	P11274	1271 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TMOD1	P28289	359 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CCT8	P50990	548 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	RPL26	P61254	145 aa	Known RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	ZNF844	Q08AG5	666 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	PDCL	Q13371	301 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	SPIDR	Q14159	915 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	HDGFL1	Q5TGJ6	251 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	STK11IP	Q8N1F8	1099 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	RHPN1	Q8TCX5	695 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NRG4	Q8WWG1	115 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TAF1D	Q9H5J8	278 aa	Predicted RBP	5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	EMILIN3	Q9NT22	766 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	SNX12	Q9UMY4	172 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CLIC4	Q9Y696	253 aa		5	□□□□□ -1.61
SLC38A9-222	ENST00000515159	COL11A2	P13942	1736 aa	Predicted RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159		A0A0D9SFI3	127 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NUDT17	P0C025	328 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CALB2	P22676	271 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CLNS1A	P54105	237 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	HDAC4	P56524	1084 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	MRPS35	P82673	323 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	RBL2	Q08999	1139 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	EZH2	Q15910	746 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	WASHC4	Q2M389	1173 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	KBTBD12	Q3ZCT8	623 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	BEND3	Q5T5X7	828 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	FOXR2	Q6PJQ5	311 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	UNC13D	Q70J99	1090 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NME8	Q8N427	588 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	MS4A4A	Q96JQ5	239 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CRAMP1	Q96RY5	1269 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	MTA3	Q9BTC8	594 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	MTFR1L	Q9H019	292 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	HERC5	Q9UII4	1024 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	USP20	Q9Y2K6	914 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	C2CD2	Q9Y426	696 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	ZNF536	O15090	1300 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	PDS5A	Q29RF7	1337 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	DOCK5	Q9H7D0	1870 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	CTAGE9	A4FU28	777 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	P4HA2	O15460	535 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	FAM153B	P0C7A2	387 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	PABPC4L	P0CB38	370 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	NAT1	P18440	290 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TXK	P42681	527 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	KIF23	Q02241	960 aa	Predicted RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	GIT2	Q14161	759 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	TTLL12	Q14166	644 aa	Predicted RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	IFI16	Q16666	785 aa	Known RBP	4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159		Q3C1V9	767 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	FAM153C	Q494X1	144 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	DBX2	Q6ZNG2	339 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	KIRREL3	Q8IZU9	778 aa		4.99	□□□□□ -1.61
SLC38A9-222	ENST00000515159	C17orf50	Q8WW18	174 aa		4.99	□□□□□ -1.61

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