RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PLAAQ9Y263 795 aa7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 TIMM13Q9Y5L4 95 aaPredicted RBP7.47□□□□□ -1.21
HMGCS1-207ENST00000514610 WTIPA6NIX2 430 aaPredicted RBP7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 AQP7O14520 342 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 NPHS1O60500 1241 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 EFCAB14O75071 495 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 CLSTN1O94985 981 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 CANXP27824 592 aaKnown RBP7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 GALK1P51570 392 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 SLC14A2Q15849 920 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 NLRX1Q86UT6 975 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 SPPL2CQ8IUH8 684 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 OXR1Q8N573 874 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 SHISA4Q96DD7 197 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 ASIC4Q96FT7 647 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 MTA3Q9BTC8 594 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 CDIP1Q9H305 208 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 ACSL6Q9UKU0 697 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 RWDD3Q9Y3V2 267 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 PCDHA8Q9Y5H6 950 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 TAF6LQ9Y6J9 622 aa7.46□□□□□ -1.22
HMGCS1-207ENST00000514610 TCRBV16S1A1N1A0A5B0 115 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 FAM83GA6ND36 823 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 RPL11P62913 178 aaKnown RBP7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 GUCY1A3Q02108 690 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 ZNF460Q14592 562 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 GALNT18Q6P9A2 607 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 CBLL1Q75N03 491 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 TEX2Q8IWB9 1127 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 NLGN2Q8NFZ4 835 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 MFSD3Q96ES6 412 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 SLKQ9H2G2 1235 aaPredicted RBP7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 BTG4Q9NY30 223 aa7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 TNPO3Q9Y5L0 923 aaKnown RBP7.45□□□□□ -1.22
HMGCS1-207ENST00000514610 A0A087X0B3 334 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 ARVCFO00192 962 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 PRKCAP17252 672 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 FPR2P25090 351 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 TACR1P25103 407 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 MASP1P48740 699 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 LSAMPQ13449 338 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 FYB2Q5VWT5 728 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 MTDHQ86UE4 582 aaKnown RBP7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 Q8N1Y9 231 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 FLAD1Q8NFF5 587 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 NUP43Q8NFH3 380 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 PLEKHO2Q8TD55 490 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 MYLIPQ8WY64 445 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 MAGEB10Q96LZ2 347 aaPredicted RBP7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 MARCH2Q9P0N8 246 aa7.44□□□□□ -1.22
HMGCS1-207ENST00000514610 MYO1BO43795 1136 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 KCNA6P17658 529 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 CORO7P57737 925 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 KIZQ2M2Z5 673 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 ABHD17CQ6PCB6 329 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 NBPF11Q86T75 865 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 KRTAP1-3Q8IUG1 177 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 RNF32Q9H0A6 362 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 MAGEC2Q9UBF1 373 aaPredicted RBP7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 ADGRE2Q9UHX3 823 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 GPR160Q9UJ42 338 aa7.43□□□□□ -1.22
HMGCS1-207ENST00000514610 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 FUCA1P04066 466 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 SOD2P04179 222 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 RAC2P15153 192 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 CEP68Q76N32 757 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 LILRA2Q8N149 483 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 CHAMP1Q96JM3 812 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 TARS2Q9BW92 718 aaKnown RBP7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 IPPKQ9H8X2 491 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 PDLIM7Q9NR12 457 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 INTS7Q9NVH2 962 aaKnown RBP7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 CLDND1Q9NY35 253 aa7.42□□□□□ -1.22
HMGCS1-207ENST00000514610 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 C22orf46C9J442 243 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 ASLP04424 464 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 MYCLP1P12525 358 aaPredicted RBP7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 GRK2P25098 689 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 GRK3P35626 688 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 GTF2A2P52657 109 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 PAK1Q13153 545 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 CNNM4Q6P4Q7 775 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 THNSL2Q86YJ6 484 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 SIRT2Q8IXJ6 389 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 LZTR1Q8N653 840 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 ABHD4Q8TB40 342 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 TMEM169Q96HH4 297 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 JAM3Q9BX67 310 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.41□□□□□ -1.222e-10■■■■■ 66.5
HMGCS1-207ENST00000514610 X6R8D5 127 aa7.41□□□□□ -1.22
HMGCS1-207ENST00000514610 A0A1W2PQ27 194 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 A0A1W2PQ64 194 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 A0A1W2PQC6 194 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 A0A1W2PQD8 194 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 H7BY64 318 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms