RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 NAF1Q96HR8 494 aaKnown RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 ABCC11Q96J66 1382 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 MXD3Q9BW11 206 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 FOXP3Q9BZS1 431 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 TCP11L1Q9NUJ3 509 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 LACTBL1A8MY62 500 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 NCAM2O15394 837 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 PMS2P54278 862 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 BRDTQ58F21 947 aaPredicted RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 ZNF600Q6ZNG1 722 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 CLEC17AQ6ZS10 378 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 TMC4Q7Z404 712 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 PNMA8AQ86V59 439 aaPredicted RBP8□□□□□ -1.13
NIPBL-208ENST00000514335 CCT7Q99832 543 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 DESI2Q9BSY9 194 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 EDARQ9UNE0 448 aa8□□□□□ -1.13
NIPBL-208ENST00000514335 SYNDIG1LA6NDD5 238 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CCDC169A6NNP5 214 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 NEMFO60524 1076 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ERLIN2O94905 339 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SKIP12755 728 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ZNF362Q5T0B9 420 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 LVRNQ6Q4G3 990 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 TMCO3Q6UWJ1 677 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 KSR2Q6VAB6 950 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SPATA2LQ8IUW3 424 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 MAML1Q92585 1016 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SNX27Q96L92 541 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CCSER1Q9C0I3 900 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 NRDE2Q9H7Z3 1164 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 LUC7LQ9NQ29 371 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ARGLU1Q9NWB6 273 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SAGE1Q9NXZ1 904 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 STAP2Q9UGK3 403 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 EPN1Q9Y6I3 576 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 TRAV6A0A075B6T7 132 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SEC24DO94855 1032 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 NDUFV2P19404 249 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 GUCY2FP51841 1108 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 PLTPP55058 493 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 DDR1Q08345 913 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 FAPQ12884 760 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 RCSD1Q6JBY9 416 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 GGT6Q6P531 493 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CARNMT1Q8N4J0 409 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 PPHLN1Q8NEY8 458 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CCSER2Q9H7U1 834 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 NGRNQ9NPE2 291 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 SPTLC3Q9NUV7 552 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ATAD3AQ9NVI7 634 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 DDX18Q9NVP1 670 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ANKRD30BQ9BXX2 1392 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 NCK2O43639 380 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 DIAPH2O60879 1101 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 TMEM127O75204 238 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 KRT18P05783 430 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 HNF1BP35680 557 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ADCY8P40145 1251 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 ETV3P41162 512 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CD86P42081 329 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CEP135Q66GS9 1140 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CORO6Q6QEF8 472 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 CCDC84Q86UT8 332 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 NXPE3Q969Y0 559 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 DNAJC18Q9H819 358 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 GALNT8Q9NY28 637 aa7.99□□□□□ -1.13
NIPBL-208ENST00000514335 HERC5Q9UII4 1024 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 GNEQ9Y223 722 aaKnown RBP7.99□□□□□ -1.13
NIPBL-208ENST00000514335 KRT14P02533 472 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 MCM3P25205 808 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 B2MP61769 119 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 TPM4P67936 248 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 STK11Q15831 433 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 FAM209AQ5JX71 171 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 WLSQ5T9L3 541 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 PPP4R3AQ6IN85 833 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 SLC4A10Q6U841 1118 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 FAM47EQ6ZV65 393 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 JAMLQ86YT9 394 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 REXO1L1PQ8IX06 675 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 DZIP1LQ8IYY4 767 aaKnown RBP7.98□□□□□ -1.13
NIPBL-208ENST00000514335 RASSF8Q8NHQ8 419 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CFAP36Q96G28 342 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CNDP1Q96KN2 507 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 PARVGQ9HBI0 331 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 FKBP14Q9NWM8 211 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 FBXO2Q9UK22 296 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-208ENST00000514335 TNS3Q68CZ2 1445 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 GAKO14976 1311 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 POTEIP0CG38 1075 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CCDC192P0DO97 292 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CDK4P11802 303 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 EVI2BP34910 448 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CASP2P42575 452 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CDKN1CP49918 316 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms