RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CYP2C9P11712 490 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 NT5C2P49902 561 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 ASPRV1Q53RT3 343 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 USP38Q8NB14 1042 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
SNHG4-208ENST00000514110 TAAR1Q96RJ0 339 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 JMJD4Q9H9V9 463 aa14.28□□□□□ -0.12
SNHG4-208ENST00000514110 ABCB11O95342 1321 aa14.27□□□□□ -0.12
SNHG4-208ENST00000514110 A6NJR5 290 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
SNHG4-208ENST00000514110 PDE4AP27815 886 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 QRICH1Q2TAL8 776 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 FAM47CQ5HY64 1035 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 KRT23Q9C075 422 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 PRDM12Q9H4Q4 367 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
SNHG4-208ENST00000514110 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 YBX2Q9Y2T7 364 aaKnown RBP14.27□□□□□ -0.13
SNHG4-208ENST00000514110 SCN10AQ9Y5Y9 1956 aa14.27□□□□□ -0.13
SNHG4-208ENST00000514110 RAD50Q92878 1312 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 B4DLN1 442 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 DHX16O60231 1041 aaKnown RBP14.26□□□□□ -0.13
SNHG4-208ENST00000514110 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
SNHG4-208ENST00000514110 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
SNHG4-208ENST00000514110 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 RAB30Q15771 203 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 BRDTQ58F21 947 aaPredicted RBP14.26□□□□□ -0.13
SNHG4-208ENST00000514110 CCDC62Q6P9F0 684 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 SEPT14Q6ZU15 432 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 CYB5R4Q7L1T6 521 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
SNHG4-208ENST00000514110 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
SNHG4-208ENST00000514110 NKX2-4Q9H2Z4 354 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 MSRAQ9UJ68 235 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 CUL9Q8IWT3 2517 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 GBF1Q92538 1859 aa14.26□□□□□ -0.13
SNHG4-208ENST00000514110 SPTBN5Q9NRC6 3674 aaKnown RBP14.25□□□□□ -0.13
SNHG4-208ENST00000514110 KPNA6O60684 536 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 RABGGTBP53611 331 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 SEC23AQ15436 765 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 LY6KQ17RY6 165 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
SNHG4-208ENST00000514110 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
SNHG4-208ENST00000514110 RMDN3Q96TC7 470 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 MAF1Q9H063 256 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 MRPL11Q9Y3B7 192 aaKnown RBP14.25□□□□□ -0.13
SNHG4-208ENST00000514110 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
SNHG4-208ENST00000514110 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 OPLAHO14841 1288 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 MYOGP15173 224 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 ARHGAP1Q07960 439 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 DEFB128Q7Z7B8 93 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 GAS2L1Q99501 681 aaPredicted RBP14.24□□□□□ -0.13
SNHG4-208ENST00000514110 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
SNHG4-208ENST00000514110 MYH6P13533 1939 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 ZBBXA8MT70 800 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 PPP1R11O60927 126 aaPredicted RBP14.23□□□□□ -0.13
SNHG4-208ENST00000514110 GH1P01241 217 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 MMP3P08254 477 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
SNHG4-208ENST00000514110 ADGRE1Q14246 886 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 STXBP2Q15833 593 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 ARHGEF16Q5VV41 709 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 CHST3Q7LGC8 479 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 MTMR8Q96EF0 704 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 PRDM6Q9NQX0 595 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
SNHG4-208ENST00000514110 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
SNHG4-208ENST00000514110 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 CFBP00751 764 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 PFKMP08237 780 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 EIF2AK2P19525 551 aaKnown RBP14.22□□□□□ -0.13
SNHG4-208ENST00000514110 HSD17B4P51659 736 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 PTH1RQ03431 593 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 KAT2BQ92831 832 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 AMNQ9BXJ7 453 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 SLC28A3Q9HAS3 691 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 SENP2Q9HC62 589 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 PXMP2Q9NR77 195 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 DDX41Q9UJV9 622 aaKnown RBP14.22□□□□□ -0.13
SNHG4-208ENST00000514110 TAF6LQ9Y6J9 622 aa14.22□□□□□ -0.13
SNHG4-208ENST00000514110 TANC1Q9C0D5 1861 aa14.21□□□□□ -0.13
SNHG4-208ENST00000514110 PALM3A6NDB9 673 aaPredicted RBP14.21□□□□□ -0.13
SNHG4-208ENST00000514110 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms