RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
TPM3-221ENST00000513769 AP3B2Q13367 1082 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 HIC1Q14526 733 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 PDIA5Q14554 519 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 MAP3K11Q16584 847 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 UVSSAQ2YD98 709 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 RESP18Q5W5W9 173 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 MOXD1Q6UVY6 613 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 C4orf32Q8N8J7 132 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 ACER1Q8TDN7 264 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 PIBF1Q8WXW3 757 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.611e-12■□□□□ 9.1
TPM3-221ENST00000513769 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 AK8Q96MA6 479 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 TNMDQ9H2S6 317 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 CLSTN2Q9H4D0 955 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 PRR12Q9ULL5 1215 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 HPSEQ9Y251 543 aa11.24□□□□□ -0.61
TPM3-221ENST00000513769 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
TPM3-221ENST00000513769 RAD21O60216 631 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 NR1I2O75469 434 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 CCDC192P0DO97 292 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
TPM3-221ENST00000513769 LIG1P18858 919 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 SLC16A2P36021 539 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 CDC37Q16543 378 aaPredicted RBP11.23□□□□□ -0.61
TPM3-221ENST00000513769 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 NEK8Q86SG6 692 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 FSIP1Q8NA03 581 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 COA7Q96BR5 231 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
TPM3-221ENST00000513769 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 FBXO2Q9UK22 296 aaPredicted RBP11.23□□□□□ -0.61
TPM3-221ENST00000513769 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
TPM3-221ENST00000513769 CYP3A7-CYP3A51PA0A087WV96 503 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 SLC26A4O43511 780 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 CYP3A7P24462 503 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 MARCKSP29966 332 aaPredicted RBP11.22□□□□□ -0.61
TPM3-221ENST00000513769 SYKP43405 635 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
TPM3-221ENST00000513769 SPP2Q13103 211 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 IKQ13123 557 aaPredicted RBP11.22□□□□□ -0.61
TPM3-221ENST00000513769 ZNF174Q15697 407 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 EARS2Q5JPH6 523 aaKnown RBP11.22□□□□□ -0.61
TPM3-221ENST00000513769 DTHD1Q6ZMT9 781 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.22□□□□□ -0.61
TPM3-221ENST00000513769 PXYLP1Q8TE99 480 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 WRNIP1Q96S55 665 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 FTOQ9C0B1 505 aaKnown RBP eCLIP11.22□□□□□ -0.61
TPM3-221ENST00000513769 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 KCNH3Q9ULD8 1083 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
TPM3-221ENST00000513769 BAZ2BQ9UIF8 2168 aaKnown RBP11.21□□□□□ -0.61
TPM3-221ENST00000513769 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
TPM3-221ENST00000513769 ABCB11O95342 1321 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 MYPNQ86TC9 1320 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 A0A1B0GVL5 298 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 SYCE3A1L190 88 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 CXCL11O14625 94 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 PPP1R11O60927 126 aaPredicted RBP11.21□□□□□ -0.61
TPM3-221ENST00000513769 INPP5BP32019 993 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 NDUFA8P51970 172 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 OAZ1P54368 228 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 PPATQ06203 517 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 COG2Q14746 738 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 SHROOM1Q2M3G4 852 aaPredicted RBP11.21□□□□□ -0.61
TPM3-221ENST00000513769 FAM83BQ5T0W9 1011 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 KRT26Q7Z3Y9 468 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 FEZ1Q99689 392 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 RAB34Q9BZG1 259 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 TSPY26PQ9H489 355 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
TPM3-221ENST00000513769 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
TPM3-221ENST00000513769 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 ZHX2Q9Y6X8 837 aa11.21□□□□□ -0.61
TPM3-221ENST00000513769 PCNTO95613 3336 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 MEIS2O14770 477 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 TBX3O15119 743 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 GPR37O15354 613 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 ZBED4O75132 1171 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 OATP04181 439 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 ICAM1P05362 532 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 CYP3A4P08684 503 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 GHRHRQ02643 423 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms