RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 PPFIA1Q13136 1202 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 IFT20Q8IY31 132 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 ZNF185O15231 689 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PRPHP41219 470 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 DCAF17Q5H9S7 520 aaPredicted RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 POTEMA6NI47 508 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PSMD14O00487 310 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 ABL1P00519 1130 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PBX1P40424 430 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PRPF4BQ13523 1007 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 MEX3CQ5U5Q3 659 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 CUL5Q93034 780 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 MLXIPQ9HAP2 919 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 TMEM260Q9NX78 707 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 THRAP3Q9Y2W1 955 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 STXBP3O00186 592 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 FANCGO15287 622 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 NT5C2P49902 561 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 TNNC1P63316 161 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 SLC7A5Q01650 507 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 DPP8Q6V1X1 898 aaPredicted RBP12.69□□□□□ -0.38
CTNND2-215ENST00000513588 MICALL1Q8N3F8 863 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 SELENOOQ9BVL4 669 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 ZC3H12CQ9C0D7 883 aaKnown RBP12.69□□□□□ -0.38
CTNND2-215ENST00000513588 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
CTNND2-215ENST00000513588 DDX25Q9UHL0 483 aaKnown RBP12.69□□□□□ -0.38
CTNND2-215ENST00000513588 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 GTF2IP78347 998 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 FKBP3Q00688 224 aaKnown RBP12.69□□□□□ -0.38
CTNND2-215ENST00000513588 ASIC2Q16515 512 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
CTNND2-215ENST00000513588 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 UNC13DQ70J99 1090 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 CEP95Q96GE4 821 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 DNAJC7Q99615 494 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 NT5C3AQ9H0P0 336 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 TCEAL9Q9UHQ7 104 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 NID2Q14112 1375 aa12.69□□□□□ -0.38
CTNND2-215ENST00000513588 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 USP17L5A8MUK1 530 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 RNF225M0QZC1 329 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 MYO1CO00159 1063 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 ARHGAP25P42331 645 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 SEMA3FQ13275 785 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 IL17AQ16552 155 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 TXNRD3Q86VQ6 643 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 LACRTQ9GZZ8 138 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 KBTBD4Q9NVX7 518 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 LRRC53A6NM62 1247 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 LRRC63Q05C16 580 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 TTC31Q49AM3 519 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 TMED8Q6PL24 325 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 COG1Q8WTW3 980 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 TNFRSF25Q93038 417 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 PSTPIP2Q9H939 334 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 PAK2Q13177 524 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
CTNND2-215ENST00000513588 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 MTRQ99707 1265 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 RIC8AQ9NPQ8 531 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 KIAA1024Q9UPX6 916 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 DUSP10Q9Y6W6 482 aa12.68□□□□□ -0.38
CTNND2-215ENST00000513588 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 NDUFAB1O14561 156 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 GGCXP38435 758 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 GUCY2FP51841 1108 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 UBE2SQ16763 222 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 SPZ1Q9BXG8 430 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 EHHADHQ08426 723 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
CTNND2-215ENST00000513588 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
CTNND2-215ENST00000513588 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 COL4A3BPQ9Y5P4 624 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 TDP2O95551 362 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 RASA1P20936 1047 aa12.67□□□□□ -0.38
CTNND2-215ENST00000513588 SLC16A2P36021 539 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms