RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 DYNC1LI2O43237 492 aaPredicted RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 POLR2MP0CAP2 368 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 EIF2AK2P19525 551 aaKnown RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 PSMA5P28066 241 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 RTP1P59025 263 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 SNX17Q15036 470 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 DUSP28Q4G0W2 176 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 ARHGEF16Q5VV41 709 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 TLK2Q86UE8 772 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 PCSK9Q8NBP7 692 aaKnown RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 IWS1Q96ST2 819 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 PXMP2Q9NR77 195 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 Q9Y3F1 56 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 hCG_1642624A0A1W2PR95 340 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 SYN1P17600 705 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 BEX3Q00994 111 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 RTN1Q16799 776 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 FBXL16Q8N461 479 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 BRF1Q92994 677 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 AP5M1Q9H0R1 490 aa20.51■□□□□ 0.87
DDR1-272ENST00000513243 FAM217BQ9NTX9 383 aaPredicted RBP20.51■□□□□ 0.87
DDR1-272ENST00000513243 RBM28Q9NW13 759 aaKnown RBP20.51■□□□□ 0.87
DDR1-272ENST00000513243 COLQQ9Y215 455 aaPredicted RBP20.51■□□□□ 0.87
DDR1-272ENST00000513243 ASGR1P07306 291 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 NR3C2P08235 984 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 FUT2Q10981 343 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 STXBP2Q15833 593 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 FSCN1Q16658 493 aaKnown RBP20.5■□□□□ 0.87
DDR1-272ENST00000513243 TRIM60Q495X7 471 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 C1orf53Q5VUE5 145 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 CHRDL2Q6WN34 429 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 AGXT2Q9BYV1 514 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 ATP11BQ9Y2G3 1177 aa20.5■□□□□ 0.87
DDR1-272ENST00000513243 GOLGA8AA7E2F4 631 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 GOLGA8BA8MQT2 603 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 CDC27P30260 824 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 RCAN1P53805 252 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 RUFY3Q7L099 469 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 FCHSD1Q86WN1 690 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 PDCD2LQ9BRP1 358 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 STARD7Q9NQZ5 370 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
DDR1-272ENST00000513243 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
DDR1-272ENST00000513243 ARIH2O95376 493 aa20.48■□□□□ 0.87
DDR1-272ENST00000513243 PPP2R5BQ15173 497 aa20.48■□□□□ 0.87
DDR1-272ENST00000513243 CCDC62Q6P9F0 684 aa20.48■□□□□ 0.87
DDR1-272ENST00000513243 SEPT14Q6ZU15 432 aa20.48■□□□□ 0.87
DDR1-272ENST00000513243 GLT1D1Q96MS3 346 aa20.48■□□□□ 0.87
DDR1-272ENST00000513243 DNAH12Q6ZR08 3092 aa20.48■□□□□ 0.87
DDR1-272ENST00000513243 EIF3JO75822 258 aaKnown RBP20.47■□□□□ 0.87
DDR1-272ENST00000513243 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
DDR1-272ENST00000513243 TLE2Q04725 743 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 CXCL17Q6UXB2 119 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 IL31RAQ8NI17 732 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 COPS5Q92905 334 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 TM6SF1Q9BZW5 370 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 PRO3102Q9H379 93 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 CYP46A1Q9Y6A2 500 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
DDR1-272ENST00000513243 ELP1O95163 1332 aa20.47■□□□□ 0.87
DDR1-272ENST00000513243 MEIS2O14770 477 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 NKRFO15226 690 aaKnown RBP eCLIP20.46■□□□□ 0.87
DDR1-272ENST00000513243 MYCLP12524 364 aaPredicted RBP20.46■□□□□ 0.87
DDR1-272ENST00000513243 ADD1P35611 737 aaKnown RBP20.46■□□□□ 0.87
DDR1-272ENST00000513243 METAP2P50579 478 aaKnown RBP eCLIP20.46■□□□□ 0.87
DDR1-272ENST00000513243 TTLL4Q14679 1199 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 PGM5Q15124 567 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 USP17L6PQ6QN14 398 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 VSIG10LQ86VR7 867 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 VTI1AQ96AJ9 217 aa20.46■□□□□ 0.87
DDR1-272ENST00000513243 RBM27Q9P2N5 1060 aaKnown RBP20.46■□□□□ 0.87
DDR1-272ENST00000513243 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
DDR1-272ENST00000513243 EVCP57679 992 aa20.45■□□□□ 0.86
DDR1-272ENST00000513243 TOB2Q14106 344 aaPredicted RBP20.45■□□□□ 0.86
DDR1-272ENST00000513243 LY6KQ17RY6 165 aa20.45■□□□□ 0.86
DDR1-272ENST00000513243 HABP4Q5JVS0 413 aaKnown RBP20.45■□□□□ 0.86
DDR1-272ENST00000513243 HEATR3Q7Z4Q2 680 aa20.45■□□□□ 0.86
DDR1-272ENST00000513243 GPKOWQ92917 476 aaPredicted RBP eCLIP20.45■□□□□ 0.86
DDR1-272ENST00000513243 GDF15Q99988 308 aa20.45■□□□□ 0.86
DDR1-272ENST00000513243 UPF3BQ9BZI7 483 aaKnown RBP20.45■□□□□ 0.86
DDR1-272ENST00000513243 PSTPIP2Q9H939 334 aa20.45■□□□□ 0.86
DDR1-272ENST00000513243 CCDC196A0A1B0GTZ2 297 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 ZEB2O60315 1214 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 PQBP1O60828 265 aaKnown RBP20.44■□□□□ 0.86
DDR1-272ENST00000513243 RGS20O76081 388 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 MAGEA10P43363 369 aaPredicted RBP20.44■□□□□ 0.86
DDR1-272ENST00000513243 WWC2Q6AWC2 1192 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 ANKRD33Q7Z3H0 272 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 SMARCC2Q8TAQ2 1214 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 CUL5Q93034 780 aa20.44■□□□□ 0.86
DDR1-272ENST00000513243 ZFP91Q96JP5 570 aaPredicted RBP20.44■□□□□ 0.86
DDR1-272ENST00000513243 DDX41Q9UJV9 622 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms