RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TAAR1Q96RJ0 339 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 RMDN3Q96TC7 470 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 TSEN34Q9BSV6 310 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 UPF3AQ9H1J1 476 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 SEC63Q9UGP8 760 aaKnown RBP7.54□□□□□ -1.2
KDM3B-208ENST00000512928 SLC12A7Q9Y666 1083 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 LCTP09848 1927 aa7.54□□□□□ -1.2
KDM3B-208ENST00000512928 PNMA6FA0A0J9YX94 578 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 A0A0U1RQG5 324 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 GCOM1H8Y6P7 765 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 POLR2MP0CAP2 368 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 TXNP10599 105 aaKnown RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 MYCLP12524 364 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 RAG1P15918 1043 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 CST5P28325 142 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 CPT1AP50416 773 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 PSMC6P62333 389 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 TRAF1Q13077 416 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 SNX17Q15036 470 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 DUSP28Q4G0W2 176 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 BRDTQ58F21 947 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 SH3RF1Q7Z6J0 888 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 TMTC2Q8N394 836 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 RGS22Q8NE09 1264 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 SCFD2Q8WU76 684 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 BADQ92934 168 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 MTMR10Q9NXD2 777 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 COL20A1Q9P218 1284 aa7.53□□□□□ -1.2
KDM3B-208ENST00000512928 GNEQ9Y223 722 aaKnown RBP7.53□□□□□ -1.2
KDM3B-208ENST00000512928 ELP1O95163 1332 aa7.52□□□□□ -1.2
KDM3B-208ENST00000512928 MROH7Q68CQ1 1323 aa7.52□□□□□ -1.2
KDM3B-208ENST00000512928 MYH6P13533 1939 aa7.52□□□□□ -1.2
KDM3B-208ENST00000512928 LOC102724159A0A0B4J2E5 919 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 A0A1W2PPC1 479 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 hCG_1642624A0A1W2PR95 340 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 TRIM43BA6NCK2 446 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 CTAGE5O15320 804 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
KDM3B-208ENST00000512928 CYTH3O43739 400 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 SORBS3O60504 671 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 REC8O95072 547 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 PLEKHA8P1O95397 391 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 CALM1P0DP23 149 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 CALM2P0DP24 149 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 CALM3P0DP25 149 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 BMP8BP34820 402 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 GNAQP50148 359 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 KRT32Q14532 448 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 PWP2Q15269 919 aaKnown RBP7.52□□□□□ -1.21
KDM3B-208ENST00000512928 STXBP2Q15833 593 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 SLC35G1Q2M3R5 365 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 ADCK5Q3MIX3 580 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 FAM47CQ5HY64 1035 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 C1orf53Q5VUE5 145 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 CCSAPQ6IQ19 270 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-208ENST00000512928 RASEFQ8IZ41 740 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 SMARCC2Q8TAQ2 1214 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 MORC4Q8TE76 937 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 COPS5Q92905 334 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 TRIM43Q96BQ3 446 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-208ENST00000512928 ZFP91Q96JP5 570 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-208ENST00000512928 GUCD1Q96NT3 240 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 IWS1Q96ST2 819 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 LZTS2Q9BRK4 669 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-208ENST00000512928 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 RIOX1Q9H6W3 641 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 PXMP2Q9NR77 195 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 GTF3C3Q9Y5Q9 886 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 SMCHD1A6NHR9 2005 aa7.52□□□□□ -1.21
KDM3B-208ENST00000512928 KLF18A0A0U1RQI7 1052 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 ARVCFO00192 962 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 OPLAHO14841 1288 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 NKRFO15226 690 aaKnown RBP eCLIP7.51□□□□□ -1.21
KDM3B-208ENST00000512928 ZBTB43O43298 467 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 CABYRO75952 493 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 NR3C2P08235 984 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 CPA1P15085 419 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 EDNRBP24530 442 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 CCND2P30279 289 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 LIFRP42702 1097 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 HSD17B4P51659 736 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 FPGSQ05932 587 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 FAAP100Q0VG06 881 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 ITGA7Q13683 1181 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 LY6KQ17RY6 165 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 DHX32Q7L7V1 743 aaKnown RBP7.51□□□□□ -1.21
KDM3B-208ENST00000512928 ANKRD33Q7Z3H0 272 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 HEATR3Q7Z4Q2 680 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 PPP1R13LQ8WUF5 828 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 CUL5Q93034 780 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 MTMR8Q96EF0 704 aa7.51□□□□□ -1.21
KDM3B-208ENST00000512928 IL17RAQ96F46 866 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms