RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 CTAGE8P0CG41 777 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 FCER1AP12319 257 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 AKR1B1P15121 316 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 GCFC2P16383 781 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 TRIM21P19474 475 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 DDR1Q08345 913 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 EHHADHQ08426 723 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 TMEM119Q4V9L6 283 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 FKBP15Q5T1M5 1219 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 HHIPL2Q6UWX4 724 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 ARHGAP27Q6ZUM4 889 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 CTAGE6Q86UF2 777 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 CTAGE4Q8IX94 777 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 LARP4BQ92615 738 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 NOC4LQ9BVI4 516 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 JMJD4Q9H9V9 463 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 TMEM260Q9NX78 707 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 MYMKA6NI61 221 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 PPEF1O14829 653 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 KRT86O43790 486 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 SASH3O75995 380 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 SEC31AO94979 1220 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 MTIF2P46199 727 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 MRPL12P52815 198 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 PAPD7Q5XG87 772 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 KRT79Q5XKE5 535 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 TRAPPC11Q7Z392 1133 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 CCDC84Q86UT8 332 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 RAD54LQ92698 747 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 CCDC17Q96LX7 622 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 EHD4Q9H223 541 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 AGPAT5Q9NUQ2 364 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 FRMPD2Q68DX3 1309 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 PES1O00541 588 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 SLC37A4O43826 429 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 ERLIN1O75477 346 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 IPO7O95373 1038 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 HERVK_113P62684 666 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 LONRF2Q1L5Z9 754 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 HYIQ5T013 277 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 DPP8Q6V1X1 898 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 ZNF771Q7L3S4 317 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 SEPT12Q8IYM1 358 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 ADGRF4Q8IZF3 695 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 PROM2Q8N271 834 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 CUL5Q93034 780 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 COA7Q96BR5 231 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 CDK5RAP3Q96JB5 506 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 RPGRIP1Q96KN7 1286 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 MRIQ9BWK5 157 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 EDEM3Q9BZQ6 932 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 NHEJ1Q9H9Q4 299 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 PUF60Q9UHX1 559 aaKnown RBP10.3□□□□□ -0.76
CPNE4-210ENST00000512332 PLAGL2Q9UPG8 496 aa10.3□□□□□ -0.76
CPNE4-210ENST00000512332 ANO9A1A5B4 782 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 ZBTB5O15062 677 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 SHMT1P34896 483 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 MCM6Q14566 821 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 VWA3BQ502W6 1294 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 BEND6Q5SZJ8 279 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 CCDC122Q5T0U0 273 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 CERS5Q8N5B7 392 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 ZC3H12CQ9C0D7 883 aaKnown RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 GBP3Q9H0R5 595 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 DDX4Q9NQI0 724 aaKnown RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 USP40Q9NVE5 1235 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 GUCA1BQ9UMX6 200 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 TDP2O95551 362 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 PICALMQ13492 652 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 SMC1AQ14683 1233 aaKnown RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 MAN2A1Q16706 1144 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 WDR93Q6P2C0 686 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 LRRC47Q8N1G4 583 aaKnown RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 HAS1Q92839 578 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 MKL1Q969V6 931 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 PKNOX2Q96KN3 472 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 TSGA10Q9BZW7 698 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 NDST4Q9H3R1 872 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 SLC39A2Q9NP94 309 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 TRPC5Q9UL62 973 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-210ENST00000512332 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
CPNE4-210ENST00000512332 GREB1LQ9C091 1923 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-210ENST00000512332 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-210ENST00000512332 LCA5LO95447 670 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 HLA-DOAP06340 250 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 USP11P51784 963 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 HDXQ7Z353 690 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 SNX29Q8TEQ0 813 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 JAKMIP2Q96AA8 810 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 NT5C3AQ9H0P0 336 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 ZSWIM4Q9H7M6 989 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 ST7Q9NRC1 585 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 DDX25Q9UHL0 483 aaKnown RBP10.28□□□□□ -0.76
CPNE4-210ENST00000512332 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
CPNE4-210ENST00000512332 SAR1BQ9Y6B6 198 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms