RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 LCTP09848 1927 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 C5orf67F2Z3F1 127 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 AMHP03971 560 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 COASYQ13057 564 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 ST3GAL2Q16842 350 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 BRDTQ58F21 947 aaPredicted RBP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 SESTD1Q86VW0 696 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 TMEM105Q8N8V8 129 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 PHF7Q9BWX1 381 aaPredicted RBP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 ACAD9Q9H845 621 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
SSBP2-215ENST00000512098 CTDP1Q9Y5B0 961 aaPredicted RBP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
SSBP2-215ENST00000512098 RB1P06400 928 aa15.28■□□□□ 0.04
SSBP2-215ENST00000512098 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
SSBP2-215ENST00000512098 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
SSBP2-215ENST00000512098 EEPD1Q7L9B9 569 aa15.28■□□□□ 0.04
SSBP2-215ENST00000512098 DHX38Q92620 1227 aaKnown RBP15.28■□□□□ 0.04
SSBP2-215ENST00000512098 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
SSBP2-215ENST00000512098 NUP88Q99567 741 aaPredicted RBP15.28■□□□□ 0.04
SSBP2-215ENST00000512098 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
SSBP2-215ENST00000512098 CRNKL1Q9BZJ0 848 aaKnown RBP15.28■□□□□ 0.04
SSBP2-215ENST00000512098 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
SSBP2-215ENST00000512098 BAZ2AQ9UIF9 1905 aaKnown RBP15.27■□□□□ 0.04
SSBP2-215ENST00000512098 GPR179Q6PRD1 2367 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 A6NJR5 290 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 LINC01565O15544 149 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 RAD21O60216 631 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 CKBP12277 381 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 MYOCDQ8IZQ8 938 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 PPP1R13LQ8WUF5 828 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 WDR11Q9BZH6 1224 aa15.27■□□□□ 0.04
SSBP2-215ENST00000512098 RAD50Q92878 1312 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 RBM47A0AV96 593 aaKnown RBP15.26■□□□□ 0.03
SSBP2-215ENST00000512098 FDX1P10109 184 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 CYP2D6P10635 497 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.033e-8■■■■■ 46.7
SSBP2-215ENST00000512098 CDK8P49336 464 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 NDUFV1P49821 464 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
SSBP2-215ENST00000512098 TRAF7Q6Q0C0 670 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 YME1L1Q96TA2 773 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 SEMA4AQ9H3S1 761 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 CLEC1BQ9P126 229 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 SALL2Q9Y467 1007 aaPredicted RBP15.26■□□□□ 0.03
SSBP2-215ENST00000512098 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
SSBP2-215ENST00000512098 ASPMQ8IZT6 3477 aa15.26■□□□□ 0.03
SSBP2-215ENST00000512098 F5H6K3 240 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 LGR5O75473 907 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 ATF7P17544 494 aaPredicted RBP15.25■□□□□ 0.03
SSBP2-215ENST00000512098 KLRC3Q07444 240 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 TNNI3KQ59H18 835 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
SSBP2-215ENST00000512098 TOP1MTQ969P6 601 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 KIFC2Q96AC6 838 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 MEIS3Q99687 375 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 C11orf84Q9BUA3 381 aaPredicted RBP15.25■□□□□ 0.03
SSBP2-215ENST00000512098 IGFLR1Q9H665 355 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 INCENPQ9NQS7 918 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 USP15Q9Y4E8 981 aaPredicted RBP15.25■□□□□ 0.03
SSBP2-215ENST00000512098 FPGT-TNNI3KV9GXZ4 949 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 MYH4Q9Y623 1939 aa15.25■□□□□ 0.03
SSBP2-215ENST00000512098 NKRFO15226 690 aaKnown RBP eCLIP15.24■□□□□ 0.03
SSBP2-215ENST00000512098 GRM6O15303 877 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 NDUFB10O96000 172 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 C16orf86Q6ZW13 317 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 KIAA2013Q8IYS2 634 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 SDR42E1Q8WUS8 393 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 FEM1BQ9UK73 627 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 PCDHGC5Q9Y5F6 944 aa15.24■□□□□ 0.03
SSBP2-215ENST00000512098 EMSYQ7Z589 1322 aa15.23■□□□□ 0.03
SSBP2-215ENST00000512098 LOC102724159A0A0B4J2E5 919 aa15.23■□□□□ 0.03
SSBP2-215ENST00000512098 PWP2Q15269 919 aaKnown RBP15.23■□□□□ 0.03
SSBP2-215ENST00000512098 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
SSBP2-215ENST00000512098 EFHBQ8N7U6 833 aa15.23■□□□□ 0.03
SSBP2-215ENST00000512098 PPP2R3CQ969Q6 453 aa15.23■□□□□ 0.03
SSBP2-215ENST00000512098 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSBP2-215ENST00000512098 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
SSBP2-215ENST00000512098 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
SSBP2-215ENST00000512098 LMNAP02545 664 aaKnown RBP15.22■□□□□ 0.03
SSBP2-215ENST00000512098 MMP1P03956 469 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 LINC00271P0C7V0 271 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 CTNNB1P35222 781 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 BMPR1AP36894 532 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 CLCN5P51795 746 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 UBALD2Q8IYN6 164 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 DBF4BQ8NFT6 615 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 SUSD6Q92537 303 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 CYP39A1Q9NYL5 469 aa15.22■□□□□ 0.03
SSBP2-215ENST00000512098 NYAP2Q9P242 653 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms