RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 LIFRP42702 1097 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 NKX3-2P78367 333 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 EXOSC10Q01780 885 aaKnown RBP15.4■□□□□ 0.06
RNF4-215ENST00000511843 PWP2Q15269 919 aaKnown RBP15.4■□□□□ 0.06
RNF4-215ENST00000511843 C1orf53Q5VUE5 145 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 SEPT14Q6ZU15 432 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 CCDC82Q8N4S0 544 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 IL31RAQ8NI17 732 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 NSUN6Q8TEA1 469 aaKnown RBP15.4■□□□□ 0.06
RNF4-215ENST00000511843 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 PXMP2Q9NR77 195 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 BRPF3Q9ULD4 1205 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 SLC12A7Q9Y666 1083 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 LAMA2P24043 3122 aaKnown RBP15.39■□□□□ 0.05
RNF4-215ENST00000511843 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
RNF4-215ENST00000511843 CLTBP09497 229 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 TXNP10599 105 aaKnown RBP15.39■□□□□ 0.05
RNF4-215ENST00000511843 ITGB8P26012 769 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 BMP8BP34820 402 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 PSMC6P62333 389 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 FAAP100Q0VG06 881 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 PPP2R5BQ15173 497 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 TSGA10IPQ3SY00 556 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 FCHSD1Q86WN1 690 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 TMTC2Q8N394 836 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 PPP1R13LQ8WUF5 828 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 BADQ92934 168 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 MPHOSPH6Q99547 160 aaKnown RBP15.39■□□□□ 0.05
RNF4-215ENST00000511843 MAP3K14Q99558 947 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 LBHD1Q9BQE6 289 aaPredicted RBP15.39■□□□□ 0.05
RNF4-215ENST00000511843 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
RNF4-215ENST00000511843 SCN10AQ9Y5Y9 1956 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
RNF4-215ENST00000511843 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
RNF4-215ENST00000511843 HSPA4P34932 840 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 GHRHRQ02643 423 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 LY6KQ17RY6 165 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 APOA5Q6Q788 366 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
RNF4-215ENST00000511843 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
RNF4-215ENST00000511843 LRCH3Q96II8 777 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 JAKMIP1Q96N16 626 aaKnown RBP15.38■□□□□ 0.05
RNF4-215ENST00000511843 GRIN2DO15399 1336 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 ELP1O95163 1332 aa15.38■□□□□ 0.05
RNF4-215ENST00000511843 B4DLN1 442 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 GCOM1H8Y6P7 765 aaPredicted RBP15.37■□□□□ 0.05
RNF4-215ENST00000511843 ARVCFO00192 962 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 SORBS3O60504 671 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 NR3C2P08235 984 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 MYL3P08590 195 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 POLR2MP0CAP2 368 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 CALM1P0DP23 149 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 CALM2P0DP24 149 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 CALM3P0DP25 149 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 CDK7P50613 346 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 MRPL12P52815 198 aaKnown RBP15.37■□□□□ 0.05
RNF4-215ENST00000511843 KRT32Q14532 448 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 STXBP2Q15833 593 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 ANKRD33Q7Z3H0 272 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 SGMS1Q86VZ5 419 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 TDHQ8IZJ6 230 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 FANCBQ8NB91 859 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 KCNB2Q92953 911 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 IWS1Q96ST2 819 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 TMEM39AQ9NV64 488 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
RNF4-215ENST00000511843 Q9Y3F1 56 aa15.37■□□□□ 0.05
RNF4-215ENST00000511843 KLF18A0A0U1RQI7 1052 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 A0A1W2PPC1 479 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 DCDC2CA8MYV0 355 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 TTLL4Q14679 1199 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 PGM5Q15124 567 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 CCDC62Q6P9F0 684 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 TMTC3Q6ZXV5 915 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 FAM126BQ8IXS8 530 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
RNF4-215ENST00000511843 PDCD2LQ9BRP1 358 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 MAF1Q9H063 256 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
RNF4-215ENST00000511843 LAMA3Q16787 3333 aa15.36■□□□□ 0.05
RNF4-215ENST00000511843 SZT2Q5T011 3432 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 SCN5AQ14524 2016 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 KIAA0355O15063 1070 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 ZEB2O60315 1214 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 RGS20O76081 388 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 REC8O95072 547 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 GNAQP50148 359 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 EPHB4P54760 987 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 PURAQ00577 322 aaKnown RBP15.35■□□□□ 0.05
RNF4-215ENST00000511843 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 C9orf50Q5SZB4 431 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 USP17L6PQ6QN14 398 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 TOX2Q96NM4 488 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 LZTS2Q9BRK4 669 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 TBX21Q9UL17 535 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms