RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 PPARAQ07869 468 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 SEC62Q99442 399 aaKnown RBP15.65■□□□□ 0.1
POLR2J3-216ENST00000511773 RBM47A0AV96 593 aaKnown RBP15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 KCNA5P22460 613 aa15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 SSTR3P32745 418 aaPredicted RBP15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 PDE4DQ08499 809 aa15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 TTBK2Q6IQ55 1244 aa15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 GPATCH3Q96I76 525 aa15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 UBE2ZQ9H832 354 aaPredicted RBP15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
POLR2J3-216ENST00000511773 KPNA6O60684 536 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 CTDSPL2Q05D32 466 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 PTGISQ16647 500 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 PPP4R3BQ5MIZ7 849 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 FAM117BQ6P1L5 589 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 GJD3Q8N144 294 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 CCDC155Q8N6L0 562 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 RANBP17Q9H2T7 1088 aaKnown RBP15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 SUGCTQ9HAC7 445 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 IL17RBQ9NRM6 502 aa15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 FRMPD2Q68DX3 1309 aaPredicted RBP15.63■□□□□ 0.09
POLR2J3-216ENST00000511773 SIP14410 1827 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 A6NJR5 290 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 NKRFO15226 690 aaKnown RBP eCLIP15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 TXNP10599 105 aaKnown RBP15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 PTPN11Q06124 597 aaPredicted RBP15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 SYDE2Q5VT97 1194 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 SCFD2Q8WU76 684 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 CRBNQ96SW2 442 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 GPCPD1Q9NPB8 672 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
POLR2J3-216ENST00000511773 PRR33A8MZF0 331 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 RANBP6O60518 1105 aaKnown RBP15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 SELPP16109 830 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 TCTN1Q2MV58 587 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 LRRFIP1Q32MZ4 808 aaKnown RBP15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 GDF6Q6KF10 455 aaPredicted RBP15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 CNKSR3Q6P9H4 555 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 RNF207Q6ZRF8 634 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 LRRC8DQ7L1W4 858 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 FAM178BQ8IXR5 827 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 CAGE1Q8TC20 777 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 AFAP1L1Q8TED9 768 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 DCAF4Q8WV16 495 aa15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 TGS1Q96RS0 853 aaKnown RBP15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 MPHOSPH6Q99547 160 aaKnown RBP15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
POLR2J3-216ENST00000511773 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 LINC01553A4QN01 128 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 ARIH2O95376 493 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 IL9P15248 144 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 GPNMBQ14956 572 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 CSPP1Q1MSJ5 1256 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 LEXMQ3ZCV2 418 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 PTCRAQ6ISU1 281 aaPredicted RBP15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 AFG1LQ8WV93 481 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 CLEC4DQ8WXI8 215 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 DHX38Q92620 1227 aaKnown RBP15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 CTAGE1Q96RT6 745 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 RAD9AQ99638 391 aa15.6■□□□□ 0.09
POLR2J3-216ENST00000511773 NBNO60934 754 aa15.59■□□□□ 0.09
POLR2J3-216ENST00000511773 GJB5O95377 273 aa15.59■□□□□ 0.09
POLR2J3-216ENST00000511773 ERVK-21P61565 698 aa15.59■□□□□ 0.09
POLR2J3-216ENST00000511773 RPS6P62753 249 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-216ENST00000511773 CHST3Q7LGC8 479 aa15.59■□□□□ 0.09
POLR2J3-216ENST00000511773 FSD1Q9BTV5 496 aa15.59■□□□□ 0.09
POLR2J3-216ENST00000511773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 MMP3P08254 477 aa15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 EDNRBP24530 442 aa15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 MRE11P49959 708 aa15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 FBXO22Q8NEZ5 403 aa15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 TOMM22Q9NS69 142 aa15.58■□□□□ 0.08
POLR2J3-216ENST00000511773 WDFY4Q6ZS81 3184 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 ABHD14A-ACY1A0A1B0GW23 586 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 H3BQ06 376 aaPredicted RBP15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 CKBP12277 381 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 ALADP13716 330 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 LY6KQ17RY6 165 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 BTNL9Q6UXG8 535 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 EP400NLQ6ZTU2 488 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 SEPT14Q6ZU15 432 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 DNERQ8NFT8 737 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 C17orf80Q9BSJ5 609 aa15.57■□□□□ 0.08
POLR2J3-216ENST00000511773 B4DLN1 442 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 FOXP2O15409 715 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 CXCL10P02778 98 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 MRPL12P52815 198 aaKnown RBP15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 ARHGAP1Q07960 439 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 IKBKEQ14164 716 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 USH1GQ495M9 461 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 ZMYM1Q5SVZ6 1142 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 SESTD1Q86VW0 696 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 C7orf31Q8N865 590 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 KAT2BQ92831 832 aa15.56■□□□□ 0.08
POLR2J3-216ENST00000511773 TMEM47Q9BQJ4 181 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms