RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
PTPN20-225ENST00000511769 PAGR1Q9BTK6 254 aa11.42□□□□□ -0.58
PTPN20-225ENST00000511769 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPN20-225ENST00000511769 MTIF3Q9H2K0 278 aaKnown RBP11.42□□□□□ -0.58
PTPN20-225ENST00000511769 GINM1Q9NU53 330 aa11.42□□□□□ -0.58
PTPN20-225ENST00000511769 NYAP2Q9P242 653 aa11.42□□□□□ -0.58
PTPN20-225ENST00000511769 MED19A0JLT2 244 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-225ENST00000511769 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 DCDC2CA8MYV0 355 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 ASNSP08243 561 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 EEF2P13639 858 aaKnown RBP11.41□□□□□ -0.58
PTPN20-225ENST00000511769 IL9P15248 144 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 CDC27P30260 824 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 ICA1Q05084 483 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 SSRP1Q08945 709 aaKnown RBP11.41□□□□□ -0.58
PTPN20-225ENST00000511769 ST3GAL1Q11201 340 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 TROAPQ12815 778 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 KCTD2Q14681 263 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 SEPT2Q15019 361 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 WDR78Q5VTH9 848 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 LARP1BQ659C4 914 aaKnown RBP11.41□□□□□ -0.58
PTPN20-225ENST00000511769 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 TRIM22Q8IYM9 498 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 ZNF280CQ8ND82 737 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 NSUN7Q8NE18 718 aaKnown RBP11.41□□□□□ -0.58
PTPN20-225ENST00000511769 SMARCC2Q8TAQ2 1214 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 MKL1Q969V6 931 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 ARHGEF10LQ9HCE6 1279 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 PHF24Q9UPV7 400 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 SIPA1L1O43166 1804 aa11.41□□□□□ -0.58
PTPN20-225ENST00000511769 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 NID2Q14112 1375 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 PTPDC1A2A3K4 754 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 EPOPA6NHQ4 379 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 SEPT4O43236 478 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 MAP3K13O43283 966 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 JAK2O60674 1132 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 CTDNEP1O95476 244 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.58
PTPN20-225ENST00000511769 TMEM199Q8N511 208 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 NPLOC4Q8TAT6 608 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 WASF1Q92558 559 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 CNTNAP3BQ96NU0 1288 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 PRRX2Q99811 253 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 LZTS2Q9BRK4 669 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 ZNF318Q5VUA4 2279 aa11.4□□□□□ -0.58
PTPN20-225ENST00000511769 A0A1W2PQ45 241 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 A0A1W2PQY0 241 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 H3BQV1 296 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 RAD21O60216 631 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 IFNAR1P17181 557 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 DDIT3P35638 169 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 COL9A2Q14055 689 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 RRP1BQ14684 758 aaKnown RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 GRM4Q14833 912 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 LRRC47Q8N1G4 583 aaKnown RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 CCDC82Q8N4S0 544 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 SLC26A6Q9BXS9 759 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 FAM217BQ9NTX9 383 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-225ENST00000511769 TBX21Q9UL17 535 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 PCDHA11Q9Y5I1 949 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 CACNA1BQ00975 2339 aa11.39□□□□□ -0.59
PTPN20-225ENST00000511769 STX6O43752 255 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 SYT1P21579 422 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 GUCY1A2P33402 732 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 NTRK3Q16288 839 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 OTOP2Q7RTS6 562 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 CLEC10AQ8IUN9 316 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 ATOH1Q92858 354 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-225ENST00000511769 PHKBQ93100 1093 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 PPP1R12CQ9BZL4 782 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 UBE2ZQ9H832 354 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-225ENST00000511769 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 SYNPO2Q9UMS6 1093 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
PTPN20-225ENST00000511769 CACNA1GO43497 2377 aa11.38□□□□□ -0.59
PTPN20-225ENST00000511769 VPS37CA5D8V6 355 aaPredicted RBP11.37□□□□□ -0.59
PTPN20-225ENST00000511769 PALM3A6NDB9 673 aaPredicted RBP11.37□□□□□ -0.59
PTPN20-225ENST00000511769 SLC15A5A6NIM6 579 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 USP17L5A8MUK1 530 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 DTNBO60941 627 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 DEXIO95424 95 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 FGBP02675 491 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 CA3P07451 260 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 XBP1P17861 261 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 PTPREP23469 700 aa11.37□□□□□ -0.59
PTPN20-225ENST00000511769 SMARCA1P28370 1054 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms