RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ACRP10323 421 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 ATP2B1P20020 1258 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 GUCY2CP25092 1073 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 POLR2BP30876 1174 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 VIPR1P32241 457 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 ETFBP38117 255 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 SNW1Q13573 536 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 RUFY4Q6ZNE9 571 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 FAM169BQ8N8A8 192 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 MARCH10Q8NA82 808 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 ANAPC16Q96DE5 110 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 DHRS1Q96LJ7 313 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 KCNC2Q96PR1 638 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 SLC9A7Q96T83 725 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 ZNF408Q9H9D4 720 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 MRVI1Q9Y6F6 885 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 FAM135AQ9P2D6 1515 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 XIRP1Q702N8 1843 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 SASH1O94885 1247 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 PRELPP51888 382 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 CASP7P55210 303 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 SSPNQ14714 243 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 HSF5Q4G112 596 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 C19orf47Q8N9M1 422 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 ARMC5Q96C12 935 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 FBXL21Q9UKT6 434 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 PLCH2O75038 1416 aa5.47□□□□□ -1.53
TOPBP1-208ENST00000511439 PLEKHD1A6NEE1 506 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 ZNF205O95201 554 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 PI3P19957 117 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 AFF3P51826 1226 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 AUHQ13825 339 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 ERICH6BQ5W0A0 696 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 THEMISQ8N1K5 641 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 ZNF512BQ96KM6 892 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 C20orf173Q96LM9 149 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 DRC1Q96MC2 740 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 SLC6A18Q96N87 628 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 CDADC1Q9BWV3 514 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 CNTD2Q9H8S5 307 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 PRKAG3Q9UGI9 489 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 GPR55Q9Y2T6 319 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 ATP7AQ04656 1500 aa5.46□□□□□ -1.54
TOPBP1-208ENST00000511439 TMEM94Q12767 1356 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 MAP3K1Q13233 1512 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 A0A1W2PQH9 124 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 IRS4O14654 1257 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 SMAD7O15105 426 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 EFEMP2O95967 443 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 GSNP06396 782 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 CYP4F8P98187 520 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 ZYXQ15942 572 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 TNNI3KQ59H18 835 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 ZPBP2Q6X784 338 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 UNC5AQ6ZN44 842 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 SLCO6A1Q86UG4 719 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 SP8Q8IXZ3 490 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 MZB1Q8WU39 189 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 SMARCC1Q92922 1105 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 DACT3Q96B18 629 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 PLCD4Q9BRC7 762 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 DSCC1Q9BVC3 393 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 ERVK13-1Q9NX77 482 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 GFOD1Q9NXC2 390 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 SLC12A7Q9Y666 1083 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 UGGT1Q9NYU2 1555 aa5.45□□□□□ -1.54
TOPBP1-208ENST00000511439 TNRQ92752 1358 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 NINLQ9Y2I6 1382 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 TRIM13O60858 407 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 STK10O94804 968 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 VAV1P15498 845 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 PRKCAP17252 672 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 SYN1P17600 705 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 GTF2F1P35269 517 aaKnown RBP eCLIP5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 BUD31P41223 144 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 EPHB3P54753 998 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 RBL2Q08999 1139 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 NFIXQ14938 502 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 NR1I3Q14994 352 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 PPP2R5EQ16537 467 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 EFCAB2Q5VUJ9 269 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 CWF19L1Q69YN2 538 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 CNKSR3Q6P9H4 555 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 DEFB132Q7Z7B7 95 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 AFAP1Q8N556 730 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 RTEL1Q9NZ71 1219 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 SUCOQ9UBS9 1254 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 ACSL6Q9UKU0 697 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 AHDC1Q5TGY3 1603 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 LTBP3Q9NS15 1303 aa5.44□□□□□ -1.54
TOPBP1-208ENST00000511439 ZC3H13Q5T200 1668 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 CTTNBP2Q8WZ74 1663 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 ABCC3O15438 1527 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 A0A1W2PQ27 194 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 A0A1W2PQ64 194 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 A0A1W2PQC6 194 aa5.43□□□□□ -1.54
TOPBP1-208ENST00000511439 A0A1W2PQD8 194 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms