RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PLIN4Q96Q06 1357 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 H0YGN5 161 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 VWA5AO00534 786 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 COBLO75128 1261 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 TTLL1O95922 423 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 TSPY3P0CV98 308 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 TSPY8P0CW00 308 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 CYP2C19P33261 490 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 MCMDC2Q4G0Z9 681 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 MFSD14CQ5VZR4 134 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 DPP9Q86TI2 863 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 REPS2Q8NFH8 660 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 DPF3Q92784 378 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 MKL1Q969V6 931 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 SLF1Q9BQI6 1058 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 HTATIP2Q9BUP3 242 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 OSBPL3Q9H4L5 887 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 MROH8Q9H579 483 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 ZNF214Q9UL59 606 aaPredicted RBP10.19□□□□□ -0.78
PDPN-209ENST00000510906 RLFQ13129 1914 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 A0A0G2JMZ2 1700 aa10.19□□□□□ -0.78
PDPN-209ENST00000510906 TRIOBPQ9H2D6 2365 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 CCDC171Q6TFL3 1326 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 MYH8P13535 1937 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 STRNO43815 780 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 NMT2O60551 498 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 FGAP02671 866 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
PDPN-209ENST00000510906 CAPN2P17655 700 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 SDSP20132 328 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 STAT3P40763 770 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 ALX1Q15699 326 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 TMCO4Q5TGY1 634 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 VASH1Q7L8A9 365 aaPredicted RBP10.18□□□□□ -0.78
PDPN-209ENST00000510906 TICAM2Q86XR7 235 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 ANAPC4Q9UJX5 808 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 OGDHLQ9ULD0 1010 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 CACNA1AO00555 2505 aa10.18□□□□□ -0.78
PDPN-209ENST00000510906 TSPY2A6NKD2 308 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 RANBP6O60518 1105 aaKnown RBP10.17□□□□□ -0.78
PDPN-209ENST00000510906 CD2BP2O95400 341 aaKnown RBP10.17□□□□□ -0.78
PDPN-209ENST00000510906 SLC25A27O95847 323 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 IGHA2P01877 340 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 FCER1AP12319 257 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 HAND2P61296 217 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 SLFN13Q68D06 897 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 LIAT1Q6ZQX7 453 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 RIOX2Q8IUF8 465 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 ABRAQ8N0Z2 381 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 PRPF38AQ8NAV1 312 aaKnown RBP10.17□□□□□ -0.78
PDPN-209ENST00000510906 EHBP1Q8NDI1 1231 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 GMCL1P1Q8NEA9 526 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 TRPV1Q8NER1 839 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 KIFC2Q96AC6 838 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 IL17RBQ9NRM6 502 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 SYNPO2Q9UMS6 1093 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 STX8Q9UNK0 236 aa10.17□□□□□ -0.78
PDPN-209ENST00000510906 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 ORC4O43929 436 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 PGK2P07205 417 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 FGRP09769 529 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 BMP3P12645 472 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 CYBAP13498 195 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 CNGA1P29973 690 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 GRM5P41594 1212 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 SEC13P55735 322 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 RRP12Q5JTH9 1297 aaKnown RBP10.16□□□□□ -0.78
PDPN-209ENST00000510906 OLFML2BQ68BL8 750 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 RASGRP2Q7LDG7 609 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 MAML3Q96JK9 1138 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 MMP19Q99542 508 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 TEX13BQ9BXU2 312 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 RAVER2Q9HCJ3 691 aaKnown RBP10.16□□□□□ -0.78
PDPN-209ENST00000510906 TOMM22Q9NS69 142 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 FEM1BQ9UK73 627 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 ISY1Q9ULR0 285 aaKnown RBP10.16□□□□□ -0.78
PDPN-209ENST00000510906 CEP290O15078 2479 aa10.16□□□□□ -0.78
PDPN-209ENST00000510906 PFASO15067 1338 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 ZMYM6O95789 1325 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 TMEM232C9JQI7 657 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 SIAH2O43255 324 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 ZBED4O75132 1171 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 MCCP23508 829 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 SCTRP47872 440 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 KCTD2Q14681 263 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 PRAMEF19Q5SWL8 479 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 SNRNP48Q6IEG0 339 aaKnown RBP10.15□□□□□ -0.78
PDPN-209ENST00000510906 CWC27Q6UX04 472 aaKnown RBP10.15□□□□□ -0.78
PDPN-209ENST00000510906 TBC1D10CQ8IV04 446 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 CPXCR1Q8N123 301 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 TPCN2Q8NHX9 752 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 C1orf216Q8TAB5 229 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 GMCL1Q96IK5 515 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 C11orf49Q9H6J7 331 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 SLC38A10Q9HBR0 1119 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 DIAPH3Q9NSV4 1193 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 SLC5A4Q9NY91 659 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms