RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CYTH3O43739 400 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 BMP3P12645 472 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 SCG2P13521 617 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 H2AFXP16104 143 aaPredicted RBP18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 MTMR2Q13614 643 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 EARS2Q5JPH6 523 aaKnown RBP18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 TTBK2Q6IQ55 1244 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 CHADLQ6NUI6 762 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 TRMT44Q8IYL2 757 aaKnown RBP18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 NAA15Q9BXJ9 866 aaKnown RBP18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 KIAA1683Q9H0B3 1180 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 FAM53CQ9NYF3 392 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 VWA3AA6NCI4 1184 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 TPM1P09493 284 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 GABPB1Q06547 395 aaPredicted RBP18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 SLC35G1Q2M3R5 365 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 CDKAL1Q5VV42 579 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 EPSTI1Q96J88 318 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 VAT1LQ9HCJ6 419 aa18.06■□□□□ 0.48
SQSTM1-213ENST00000510187 CALML3P27482 149 aa18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 SLC16A2P36021 539 aa18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 APTXQ7Z2E3 356 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 IQUBQ8NA54 791 aa18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 CLMNQ96JQ2 1002 aa18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 ELP3Q9H9T3 547 aa18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 SH3GLB2Q9NR46 395 aa18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 SAMSN1Q9NSI8 373 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-213ENST00000510187 AKR1B15C9JRZ8 316 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 USP14P54578 494 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 BACE1P56817 501 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 IKQ13123 557 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 FAM83BQ5T0W9 1011 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 ARL6IP4Q66PJ3 421 aaKnown RBP18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 FAM177A1Q8N128 213 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 KRT222Q8N1A0 295 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 LPAR1Q92633 364 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 V9GYY5 206 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 ITIH6Q6UXX5 1313 aa18.04■□□□□ 0.48
SQSTM1-213ENST00000510187 CELF2O95319 508 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 PBX1P40424 430 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 ZNF174Q15697 407 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 E2F4Q16254 413 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 FILIP1LQ4L180 1135 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 ADGRF4Q8IZF3 695 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 RRP36Q96EU6 259 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 PRDM10Q9NQV6 1147 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 PRDM4Q9UKN5 801 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 AFG3L2Q9Y4W6 797 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 PAPPA2Q9BXP8 1791 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 BAZ2BQ9UIF8 2168 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 EFCAB8A8MWE9 144 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 PPP1R3GB7ZBB8 358 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 ITGBL1O95965 494 aaPredicted RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 AFMP43652 599 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 NLRP5P59047 1200 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 GOLGA8FQ08AF8 430 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 GOLGA8DPQ0D2H9 430 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 PTGDRQ13258 359 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 DGKZQ13574 1117 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 MNS1Q8NEH6 495 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 CCDC51Q96ER9 411 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 GBA2Q9HCG7 927 aaPredicted RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 ADD3Q9UEY8 706 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 SEC63Q9UGP8 760 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 OTOFQ9HC10 1997 aa18.03■□□□□ 0.48
SQSTM1-213ENST00000510187 C19orf81C9J6K1 198 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 GTPBP6O43824 516 aaPredicted RBP18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 TADA3O75528 432 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 STAT2P52630 851 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 FKBP1BP68106 108 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 ERCC6LQ2NKX8 1250 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 LDLRAD1Q5T700 205 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 ERO1BQ86YB8 467 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 PIGSQ96S52 555 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 EMILIN3Q9NT22 766 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 ARGLU1Q9NWB6 273 aaPredicted RBP18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 RMND1Q9NWS8 449 aa18.02■□□□□ 0.48
SQSTM1-213ENST00000510187 WNT7AO00755 349 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 WDR46O15213 610 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 URI1O94763 535 aaPredicted RBP18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 CD44P16070 742 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 CASQ1P31415 396 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 LONP1P36776 959 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 HMGCS2P54868 508 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 PPATQ06203 517 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 SPAG1Q07617 926 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 HSP90AA4PQ58FG1 418 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 PDXDC2PQ6P474 469 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 PPFIBP1Q86W92 1011 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 UBXN4Q92575 508 aa18.01■□□□□ 0.47
SQSTM1-213ENST00000510187 OTUD5Q96G74 571 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms