RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	RMDN1	Q96DB5	314 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	DDX11	Q96FC9	970 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	CLDND1	Q9NY35	253 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	RALGAPA2	Q2PPJ7	1873 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	USP24	Q9UPU5	2620 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	WDR46	O15213	610 aa	Known RBP	11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	GJB5	O95377	273 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	SUPT20HL2	P0C7V6	817 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	PLCD1	P51178	756 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	TNFAIP2	Q03169	654 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	DLX2	Q07687	328 aa	Predicted RBP	11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	CLUL1	Q15846	466 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	PPP1R18	Q6NYC8	613 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	NOL8	Q76FK4	1167 aa	Known RBP	11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	ADSSL1	Q8N142	457 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	ASIC4	Q96FT7	647 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	RAD9A	Q99638	391 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	PRKD2	Q9BZL6	878 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	COPRS	Q9NQ92	184 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	RIPK3	Q9Y572	518 aa		11.68	□□□□□ -0.54
PTPN20-223	ENST00000509900	LCT	P09848	1927 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	RBAK-RBAKDN	I3L0D1	243 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	STXBP3	O00186	592 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	MPHOSPH10	O00566	681 aa	Known RBP	11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	GABPA	Q06546	454 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	TFCP2	Q12800	502 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	GPNMB	Q14956	572 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	DGLUCY	Q7Z3D6	616 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	TTC6	Q86TZ1	520 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	RPAIN	Q86UA6	219 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	CCDC144CP	Q8IYA2	1237 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	NEUROD6	Q96NK8	337 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	VCPKMT	Q9H867	229 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	CTNNA3	Q9UI47	895 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	PPP1R9A	Q9ULJ8	1098 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	TMX2	Q9Y320	296 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	MYO10	Q9HD67	2058 aa		11.67	□□□□□ -0.54
PTPN20-223	ENST00000509900	DYNC1LI2	O43237	492 aa	Predicted RBP	11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	KDM4A	O75164	1064 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	SMPD1	P17405	629 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	MLLT3	P42568	568 aa	Predicted RBP	11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	SLC4A3	P48751	1232 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	SIGLEC14	Q08ET2	396 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	LAPTM4A	Q15012	233 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	PTPRO	Q16827	1216 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	TCTN1	Q2MV58	587 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	CTC1	Q2NKJ3	1217 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	TMEM63B	Q5T3F8	832 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	TSHZ2	Q9NRE2	1034 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	SNRK	Q9NRH2	765 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	AKAP2	Q9Y2D5	859 aa		11.66	□□□□□ -0.54
PTPN20-223	ENST00000509900	ZEB2	O60315	1214 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	USP5	P45974	858 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	COPS2	P61201	443 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	SMAD4	Q13485	552 aa	Known RBP	11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	SNRNP48	Q6IEG0	339 aa	Known RBP	11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	FRMD5	Q7Z6J6	570 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	RETREG2	Q8NC44	543 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	NKD2	Q969F2	451 aa	Predicted RBP	11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	TEX13B	Q9BXU2	312 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	AP5M1	Q9H0R1	490 aa		11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	NSUN3	Q9H649	340 aa	Known RBP	11.65	□□□□□ -0.54
PTPN20-223	ENST00000509900	FASN	P49327	2511 aa	Known RBP	11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	PDGFB	P01127	241 aa	Predicted RBP	11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	EPC2	Q52LR7	807 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	GORAB	Q5T7V8	394 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	FAM117B	Q6P1L5	589 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	TMEM179	Q6ZVK1	233 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	MIGA1	Q8NAN2	632 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	PPP1R13L	Q8WUF5	828 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	FAM208B	Q5VWN6	2430 aa		11.64	□□□□□ -0.55
PTPN20-223	ENST00000509900	LOC730098	B7Z3J9	87 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900		H3BNC9	293 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	TBX10	O75333	385 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	CYP2E1	P05181	493 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	COL9A2	Q14055	689 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	KCNV2	Q8TDN2	545 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	CRBN	Q96SW2	442 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	ARHGEF10L	Q9HCE6	1279 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	PDGFC	Q9NRA1	345 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	DDX49	Q9Y6V7	483 aa	Known RBP	11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	FRYL	O94915	3013 aa		11.63	□□□□□ -0.55
PTPN20-223	ENST00000509900	UQCRFS1P1	P0C7P4	283 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	CYP7A1	P22680	504 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	PURA	Q00577	322 aa	Known RBP	11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	CNTN2	Q02246	1040 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	ICA1	Q05084	483 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	GPM6B	Q13491	265 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	BFSP2	Q13515	415 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	CBX2	Q14781	532 aa	Predicted RBP	11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	FAM47C	Q5HY64	1035 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	FAM83B	Q5T0W9	1011 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	CNKSR3	Q6P9H4	555 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	COL26A1	Q96A83	441 aa		11.62	□□□□□ -0.55
PTPN20-223	ENST00000509900	SH2D4A	Q9H788	454 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms